Searching in Paramagnetospirillum magneticum AMB-1 (GCF_000009985.1)
Found 108 curated entries in PaperBLAST's database that match '1.4.1.2'.
These curated entries have 87 distinct sequences.
Running ublast with E ≤ 0.01
Found 12 relevant proteins in Paramagnetospirillum magneticum AMB-1, or try another query
| lpdA AMB_RS20050 amb3963 WP_011386317.1: dihydrolipoyl dehydrogenase is similar to: | PaperBLAST |
P31023: pyruvate dehydrogenase system (subunit 1/3) (EC 1.2.1.104); glycine cleavage system (subunit 4/4) (EC 1.4.1.27) from Pisum sativum | 62% id, 93% cov |
Q9M5K3: glycine cleavage system (subunit 5/5) (EC 1.4.1.27) from Arabidopsis thaliana | 60% id, 92% cov |
P09622: pyruvate dehydrogenase system (subunit 1/5) (EC 1.2.1.104); 2-oxoglutarate dehydrogenase system (subunit 1/3) (EC 1.2.1.105); glycine cleavage system (subunit 1/4) (EC 1.4.1.27); dihydrolipoyl dehydrogenase (EC 1.8.1.4); dihydrolipoyllysine-residue (2-methylpropanoyl)transferase (EC 2.3.1.168) from Homo sapiens | 56% id, 92% cov |
| AMB_RS00165 amb0031 WP_011382479.1: NAD-glutamate dehydrogenase is similar to: | PaperBLAST |
AZOBR_RS00190: L-glutamate dehydrogenase (NAD+) (EC 1.4.1.2) from Azospirillum brasilense | 55% id, 99% cov |
Q8CJY0: glutamate dehydrogenase (EC 1.4.1.2) from Streptomyces coelicolor | 48% id, 96% cov |
Psest_1944: NAD-specific glutamate dehydrogenase (EC 1.4.1.2), large form from Pseudomonas stutzeri | 47% id, 97% cov |
| gcvPA AMB_RS03935 amb0768 WP_011383211.1: aminomethyl-transferring glycine dehydrogenase subunit GcvPA is similar to: | PaperBLAST |
B0F465: glycine cleavage system (subunit 4/5) (EC 1.4.1.27) from Paratrimastix pyriformis | 54% id, 97% cov |
Q91W43: glycine cleavage system (EC 1.4.1.27) from Mus musculus | 34% id, 41% cov |
P15505: glycine cleavage system (EC 1.4.1.27); glycine dehydrogenase (aminomethyl-transferring) (EC 1.4.4.2) from Gallus gallus | 33% id, 41% cov |
| gcvT AMB_RS03925 amb0766 WP_011383209.1: glycine cleavage system aminomethyltransferase GcvT is similar to: | PaperBLAST |
P28337: glycine cleavage system (subunit 1/3) (EC 1.4.1.27) from Gallus gallus | 48% id, 93% cov |
P48728: glycine cleavage system (subunit 2/4) (EC 1.4.1.27) from Homo sapiens | 49% id, 91% cov |
P49364: glycine cleavage system (subunit 1/4) (EC 1.4.1.27) from Pisum sativum | 47% id, 92% cov |
| gcvH AMB_RS03930 amb0767 WP_011383210.1: glycine cleavage system protein GcvH is similar to: | PaperBLAST |
P0A6T9: glycine cleavage system (subunit 2/3) (EC 1.4.1.27) from Escherichia coli | 48% id, 92% cov |
GCSH / A8HYD5: glycine cleavage system H protein (EC 1.4.1.27) from Chlamydomonas reinhardtii | 54% id, 74% cov |
B0F467: glycine cleavage system (subunit 5/5) (EC 1.4.1.27) from Paratrimastix pyriformis | 46% id, 84% cov |
| lpdA AMB_RS11730 amb2321 WP_011384718.1: dihydrolipoyl dehydrogenase is similar to: | PaperBLAST |
P31023: pyruvate dehydrogenase system (subunit 1/3) (EC 1.2.1.104); glycine cleavage system (subunit 4/4) (EC 1.4.1.27) from Pisum sativum | 38% id, 93% cov |
P72740: glycine cleavage system (subunit 2/2) (EC 1.4.1.27) from Synechocystis sp. | 36% id, 99% cov |
P09622: pyruvate dehydrogenase system (subunit 1/5) (EC 1.2.1.104); 2-oxoglutarate dehydrogenase system (subunit 1/3) (EC 1.2.1.105); glycine cleavage system (subunit 1/4) (EC 1.4.1.27); dihydrolipoyl dehydrogenase (EC 1.8.1.4); dihydrolipoyllysine-residue (2-methylpropanoyl)transferase (EC 2.3.1.168) from Homo sapiens | 38% id, 92% cov |
| gor AMB_RS08430 amb1666 WP_011384075.1: glutathione-disulfide reductase is similar to: | PaperBLAST |
P72740: glycine cleavage system (subunit 2/2) (EC 1.4.1.27) from Synechocystis sp. | 33% id, 97% cov |
P0A9P0: pyruvate dehydrogenase system (EC 1.2.1.104); 2-oxoglutarate dehydrogenase system (subunit 1/3) (EC 1.2.1.105); glycine cleavage system (EC 1.4.1.27); dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Escherichia coli | 29% id, 94% cov |
P09622: pyruvate dehydrogenase system (subunit 1/5) (EC 1.2.1.104); 2-oxoglutarate dehydrogenase system (subunit 1/3) (EC 1.2.1.105); glycine cleavage system (subunit 1/4) (EC 1.4.1.27); dihydrolipoyl dehydrogenase (EC 1.8.1.4); dihydrolipoyllysine-residue (2-methylpropanoyl)transferase (EC 2.3.1.168) from Homo sapiens | 30% id, 89% cov |
| gcvPB AMB_RS03940 amb0769 WP_011383212.1: aminomethyl-transferring glycine dehydrogenase subunit GcvPB is similar to: | PaperBLAST |
P33195: glycine cleavage system (subunit 1/3) (EC 1.4.1.27) from Escherichia coli | 44% id, 42% cov |
P15505: glycine cleavage system (EC 1.4.1.27); glycine dehydrogenase (aminomethyl-transferring) (EC 1.4.4.2) from Gallus gallus | 38% id, 42% cov |
P23378: glycine cleavage system (subunit 4/4) (EC 1.4.1.27); glycine dehydrogenase (aminomethyl-transferring) (EC 1.4.4.2) from Homo sapiens | 38% id, 42% cov |
| AMB_RS15050 amb2990 WP_011385366.1: 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein is similar to: | PaperBLAST |
P31023: pyruvate dehydrogenase system (subunit 1/3) (EC 1.2.1.104); glycine cleavage system (subunit 4/4) (EC 1.4.1.27) from Pisum sativum | 21% id, 64% cov |
| ahcY AMB_RS22210 amb4391 WP_011386736.1: adenosylhomocysteinase is similar to: | PaperBLAST |
DHPH_CALTT / F5L9G2: Phenylalanine dehydrogenase; PheDH; EC 1.4.1.20 from Caldalkalibacillus thermarum | 26% id, 49% cov |
| AMB_RS11780 amb2332 WP_011384729.1: glutamate synthase subunit beta is similar to: | PaperBLAST |
P31023: pyruvate dehydrogenase system (subunit 1/3) (EC 1.2.1.104); glycine cleavage system (subunit 4/4) (EC 1.4.1.27) from Pisum sativum | 25% id, 31% cov |
| AMB_RS17475 amb3454 WP_011385814.1: FAD-dependent oxidoreductase is similar to: | PaperBLAST |
P31023: pyruvate dehydrogenase system (subunit 1/3) (EC 1.2.1.104); glycine cleavage system (subunit 4/4) (EC 1.4.1.27) from Pisum sativum | 30% id, 11% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 9 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 822595-823809 (frame +1) on NC_007626.1 Paramagnetospirillum magneticum AMB-1, complete sequence is similar to: | PaperBLAST |
P28337: glycine cleavage system (subunit 1/3) (EC 1.4.1.27) from Gallus gallus | 47% id, 98% cov |
P48728: glycine cleavage system (subunit 2/4) (EC 1.4.1.27) from Homo sapiens | 47% id, 96% cov |
P49364: glycine cleavage system (subunit 1/4) (EC 1.4.1.27) from Pisum sativum | 47% id, 93% cov |
| 823386-824198 (frame +3) on NC_007626.1 Paramagnetospirillum magneticum AMB-1, complete sequence is similar to: | PaperBLAST |
P20821: glycine cleavage system (EC 1.4.1.27) from Bos taurus | 45% id, 99% cov |
P11183: H-protein-(lipoyl)lysine (EC 1.4.1.27) from Gallus gallus | 48% id, 88% cov |
GCSH / A8HYD5: glycine cleavage system H protein (EC 1.4.1.27) from Chlamydomonas reinhardtii | 50% id, 84% cov |
Lawrence Berkeley National Laboratory