Curated BLAST for Genomes

 

Curated BLAST

Searching in Paramagnetospirillum magneticum AMB-1 (GCF_000009985.1)

Found 5 curated entries in PaperBLAST's database that match '1.4.3.25' as complete word(s).

These curated entries have 5 distinct sequences.

Running ublast with E ≤ 0.01

Found 7 relevant proteins in Paramagnetospirillum magneticum AMB-1, or try another query

AMB_RS17475 amb3454 WP_011385814.1: FAD-dependent oxidoreductase
is similar to:
PaperBLAST

P72346: L-amino-acid oxidase (EC 1.4.3.2); L-arginine oxidase (EC 1.4.3.25) from Synechococcus elongatus

28% id,
33% cov

AMB_RS11780 amb2332 WP_011384729.1: glutamate synthase subunit beta
is similar to:
PaperBLAST

P72346: L-amino-acid oxidase (EC 1.4.3.2); L-arginine oxidase (EC 1.4.3.25) from Synechococcus elongatus

25% id,
29% cov

OXLA_MOUSE / O09046: L-amino-acid oxidase; LAAO; LAO; Interleukin-4-induced protein 1; IL4-induced protein 1; mIL4I1; Protein Fig-1; mFIG1; EC 1.4.3.2; EC 1.4.3.25 from Mus musculus

33% id,
11% cov

OXLA_HUMAN / Q96RQ9: L-amino-acid oxidase; LAAO; LAO; Interleukin-4-induced protein 1; IL4-induced protein 1; hIL4I1; Protein Fig-1; hFIG1; EC 1.4.3.2; EC 1.4.3.25 from Homo sapiens

46% id,
7% cov

AMB_RS14080 amb2799 WP_148207629.1: D-amino acid dehydrogenase
is similar to:
PaperBLAST

P72346: L-amino-acid oxidase (EC 1.4.3.2); L-arginine oxidase (EC 1.4.3.25) from Synechococcus elongatus

36% id,
15% cov

AMB_RS12625 amb2510 WP_011384891.1: FAD-dependent oxidoreductase
is similar to:
PaperBLAST

OXLA_MOUSE / O09046: L-amino-acid oxidase; LAAO; LAO; Interleukin-4-induced protein 1; IL4-induced protein 1; mIL4I1; Protein Fig-1; mFIG1; EC 1.4.3.2; EC 1.4.3.25 from Mus musculus

38% id,
12% cov

OXLA_HUMAN / Q96RQ9: L-amino-acid oxidase; LAAO; LAO; Interleukin-4-induced protein 1; IL4-induced protein 1; hIL4I1; Protein Fig-1; hFIG1; EC 1.4.3.2; EC 1.4.3.25 from Homo sapiens

37% id,
12% cov

AMB_RS02690 amb0522 WP_011382965.1: NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

P72346: L-amino-acid oxidase (EC 1.4.3.2); L-arginine oxidase (EC 1.4.3.25) from Synechococcus elongatus

52% id,
9% cov

OXLA_MOUSE / O09046: L-amino-acid oxidase; LAAO; LAO; Interleukin-4-induced protein 1; IL4-induced protein 1; mIL4I1; Protein Fig-1; mFIG1; EC 1.4.3.2; EC 1.4.3.25 from Mus musculus

43% id,
6% cov

AMB_RS19325 amb3817 WP_011386171.1: NAD(P)/FAD-dependent oxidoreductase
is similar to:
PaperBLAST

OXLA_HUMAN / Q96RQ9: L-amino-acid oxidase; LAAO; LAO; Interleukin-4-induced protein 1; IL4-induced protein 1; hIL4I1; Protein Fig-1; hFIG1; EC 1.4.3.2; EC 1.4.3.25 from Homo sapiens

38% id,
11% cov

AMB_RS17075 amb3375 WP_011385735.1: NAD(P)-binding protein
is similar to:
PaperBLAST

P72346: L-amino-acid oxidase (EC 1.4.3.2); L-arginine oxidase (EC 1.4.3.25) from Synechococcus elongatus

49% id,
7% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory