Searching in Paramagnetospirillum magneticum AMB-1 (GCF_000009985.1)
Found 18 curated entries in PaperBLAST's database that match '2.1.1.13' as complete word(s).
These curated entries have 12 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Paramagnetospirillum magneticum AMB-1, or try another query
AMB_RS02225 amb0429 WP_043743213.1: methionine synthase is similar to: | PaperBLAST |
metH / Q8NQD1: cobalamin-dependent methionine synthase (EC 2.1.1.13) from Corynebacterium glutamicum | 48% id, 99% cov |
PGA1_c13350: Methionine synthase component, B12 binding and B12-binding cap domains (EC:2.1.1.13) from Phaeobacter inhibens | 36% id, 88% cov |
DVU1585: Methionine synthase (cobalamin-dependent) (EC 2.1.1.13) from Desulfovibrio vulgaris | 32% id, 98% cov |
AMB_RS01570 amb0310 WP_011382757.1: protein meaA is similar to: | PaperBLAST |
metH / Q8NQD1: cobalamin-dependent methionine synthase (EC 2.1.1.13) from Corynebacterium glutamicum | 25% id, 20% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
469110-472640 (frame -2) on NC_007626.1 Magnetospirillum magneticum AMB-1 DNA, complete genome is similar to: | PaperBLAST |
metH / Q8NQD1: cobalamin-dependent methionine synthase (EC 2.1.1.13) from Corynebacterium glutamicum | 47% id, 100% cov |
Lawrence Berkeley National Laboratory