Curated BLAST for Genomes

 

Curated BLAST

Searching in Magnetospirillum magneticum AMB-1 (GCF_000009985.1)

Found 26 curated entries in PaperBLAST's database that match '2.3.1.8' as complete word(s).

These curated entries have 19 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Magnetospirillum magneticum AMB-1, or try another query

AMB_RS12865 amb2556 WP_011384937.1: bifunctional enoyl-CoA hydratase/phosphate acetyltransferase
is similar to:
PaperBLAST

CH_090885: phosphate acetyltransferase; EC 2.3.1.8 from Thermotoga maritima

43% id,
95% cov

pta / P71103: phosphate acetyltransferase (EC 2.3.1.8) from Clostridium acetobutylicum

30% id,
88% cov

Q5LMK3: phosphate acetyltransferase (EC 2.3.1.8) from Ruegeria pomeroyi

27% id,
94% cov

More...

AMB_RS01465 amb0289 WP_011382736.1: NADP-dependent malic enzyme
is similar to:
PaperBLAST

pta / Q9F1X6: phosphotransacetylase (EC 2.3.1.8) from Lactobacillus sanfranciscensis

31% id,
98% cov

pta / P71103: phosphate acetyltransferase (EC 2.3.1.8) from Clostridium acetobutylicum

31% id,
98% cov

O52593: phosphate acetyltransferase (EC 2.3.1.8) from Hungateiclostridium thermocellum

30% id,
98% cov

More...

AMB_RS03695 amb0720 WP_043745954.1: NADP-dependent malic enzyme
is similar to:
PaperBLAST

EUTD_SALTY / P41790: Phosphate acetyltransferase EutD; Ethanolamine utilization protein EutD; Phosphotransacetylase EutD; PATC EutD; EC 2.3.1.8 from Salmonella typhimurium
P41790: phosphate acetyltransferase (EC 2.3.1.8) from Salmonella enterica

30% id,
98% cov

pta / P71103: phosphate acetyltransferase (EC 2.3.1.8) from Clostridium acetobutylicum

29% id,
98% cov

EUTD_ECOLI / P77218: Phosphate acetyltransferase EutD; Ethanolamine utilization protein EutD; EC 2.3.1.8 from Escherichia coli
YpfA / b2458: phosphate acetyltransferase EutD (EC 2.3.1.8) from Escherichia coli
eutD / P77218: phosphate acetyltransferase EutD (EC 2.3.1.8) from Escherichia coli

29% id,
97% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory