Curated BLAST for Genomes

 

Curated BLAST

Searching in Magnetospirillum magneticum AMB-1 (GCF_000009985.1)

Found 119 curated entries in PaperBLAST's database that match '2.3.1.9'.

These curated entries have 98 distinct sequences.

Running ublast with E ≤ 0.01

Found 11 relevant proteins in Magnetospirillum magneticum AMB-1, or try another query

AMB_RS18210 amb3598 WP_043745132.1: acetyl-CoA C-acyltransferase
is similar to:
PaperBLAST

AO353_25685: acetyl-CoA:acetyl-CoA C-acetyltransferase / acetyl-CoA:propanoyl-CoA 2-C-acetyltransferase (EC 2.3.1.9; EC 2.3.1.16) from Pseudomonas fluorescens

71% id,
99% cov

D0EUY6: acetyl-CoA C-acetyltransferase (EC 2.3.1.9) from Medicago sativa

51% id,
98% cov

ER10B_ASPFC / B0YA65: Acetyl-CoA acetyltransferase erg10B, cytosolic; Acetoacetyl-CoA thiolase erg10B; ACAT; Cytosolic thiolase erg10B; CT; Ergosterol biosynthesis protein 10B; EC 2.3.1.9 from Neosartorya fumigata
ER10B_ASPFU / Q4WCL5: Acetyl-CoA acetyltransferase erg10B, cytosolic; Acetoacetyl-CoA thiolase erg10B; ACAT; Cytosolic thiolase erg10B; CT; Ergosterol biosynthesis protein 10B; EC 2.3.1.9 from Neosartorya fumigata

50% id,
100% cov

More...

AMB_RS04295 amb0842 WP_011383284.1: acetyl-CoA C-acetyltransferase
is similar to:
PaperBLAST

THIL_RHIME / P50174: Acetyl-CoA acetyltransferase; Acetoacetyl-CoA thiolase; Beta-ketothiolase; EC 2.3.1.9 from Rhizobium meliloti
SMc03879: Acetyl-CoA acetyltransferase (EC 2.3.1.9) from Sinorhizobium meliloti

67% id,
99% cov

THIL_ZOORA / P07097: Acetyl-CoA acetyltransferase; Acetoacetyl-CoA thiolase; Beta-ketothiolase; EC 2.3.1.9 from Zoogloea ramigera

65% id,
99% cov

THIL_CUPNH / P14611: Acetyl-CoA acetyltransferase; Acetoacetyl-CoA thiolase; Beta-ketothiolase; EC 2.3.1.9 from Cupriavidus necator

64% id,
100% cov

More...

AMB_RS13850 amb2754 WP_011385133.1: 3-oxoadipyl-CoA thiolase
is similar to:
PaperBLAST

AtoB / b2224: acetyl-CoA acetyltransferase (EC 2.3.1.16; EC 2.3.1.9) from Escherichia coli

48% id,
100% cov

AO356_21640: acetyl-CoA C-acetyltransferase [EC: 2.3.1.9] from Pseudomonas fluorescens

48% id,
100% cov

THIL_CUPNH / P14611: Acetyl-CoA acetyltransferase; Acetoacetyl-CoA thiolase; Beta-ketothiolase; EC 2.3.1.9 from Cupriavidus necator

48% id,
100% cov

More...

AMB_RS13060 amb2595 WP_011384976.1: acetyl-CoA C-acyltransferase
is similar to:
PaperBLAST

THIL_CUPNH / P14611: Acetyl-CoA acetyltransferase; Acetoacetyl-CoA thiolase; Beta-ketothiolase; EC 2.3.1.9 from Cupriavidus necator

44% id,
100% cov

THIL_ALLVD / P45369: Acetyl-CoA acetyltransferase; Acetoacetyl-CoA thiolase; Beta-ketothiolase; EC 2.3.1.9 from Allochromatium vinosum

44% id,
98% cov

AtoB / b2224: acetyl-CoA acetyltransferase (EC 2.3.1.16; EC 2.3.1.9) from Escherichia coli

43% id,
100% cov

More...

AMB_RS15045 amb2989 WP_011385365.1: thiolase family protein
is similar to:
PaperBLAST

AtoB / b2224: acetyl-CoA acetyltransferase (EC 2.3.1.16; EC 2.3.1.9) from Escherichia coli

27% id,
96% cov

FADA4_MYCTU / P9WG69: Probable acetyl-CoA acetyltransferase; Acetoacetyl-CoA thiolase; EC 2.3.1.9 from Mycobacterium tuberculosis

26% id,
97% cov

D2IH11: acetyl-CoA C-acetyltransferase (EC 2.3.1.9) from Helianthus annuus

25% id,
93% cov

More...

AMB_RS09835 amb1949 WP_011384352.1: KR domain-containing protein
is similar to:
PaperBLAST

ERYA2_SACER / Q03132: 6-deoxyerythronolide-B synthase EryA2, modules 3 and 4; DEBS 2; 6-deoxyerythronolide B synthase II; Erythronolide synthase; ORF B; EC 2.3.1.94 from Saccharopolyspora erythraea
Q03132: 6-deoxyerythronolide-B synthase (subunit 2/3) (EC 2.3.1.94) from Saccharopolyspora erythraea

33% id,
34% cov

ERYA1_SACER / Q03131: 6-deoxyerythronolide-B synthase EryA1, modules 1 and 2; DEBS 1; 6-deoxyerythronolide B synthase I; Erythronolide synthase; ORF C; EC 2.3.1.94 from Saccharopolyspora erythraea
Q03131: 6-deoxyerythronolide-B synthase (subunit 3/3) (EC 2.3.1.94) from Saccharopolyspora erythraea

35% id,
27% cov

ERYA3_SACER / Q03133: 6-deoxyerythronolide-B synthase EryA3, modules 5 and 6; DEBS 3; 6-deoxyerythronolide B synthase III; Erythronolide synthase; ORF C; EC 2.3.1.94 from Saccharopolyspora erythraea
Q03133: 6-deoxyerythronolide-B synthase (EC 2.3.1.94) from Saccharopolyspora erythraea

35% id,
27% cov

More...

AMB_RS10635 amb2108 WP_043744173.1: beta-ketoacyl-[acyl-carrier-protein] synthase II
is similar to:
PaperBLAST

ERYA3_SACER / Q03133: 6-deoxyerythronolide-B synthase EryA3, modules 5 and 6; DEBS 3; 6-deoxyerythronolide B synthase III; Erythronolide synthase; ORF C; EC 2.3.1.94 from Saccharopolyspora erythraea
Q03133: 6-deoxyerythronolide-B synthase (EC 2.3.1.94) from Saccharopolyspora erythraea

29% id,
12% cov

ERYA2_SACER / Q03132: 6-deoxyerythronolide-B synthase EryA2, modules 3 and 4; DEBS 2; 6-deoxyerythronolide B synthase II; Erythronolide synthase; ORF B; EC 2.3.1.94 from Saccharopolyspora erythraea
Q03132: 6-deoxyerythronolide-B synthase (subunit 2/3) (EC 2.3.1.94) from Saccharopolyspora erythraea

28% id,
11% cov

ERYA1_SACER / Q03131: 6-deoxyerythronolide-B synthase EryA1, modules 1 and 2; DEBS 1; 6-deoxyerythronolide B synthase I; Erythronolide synthase; ORF C; EC 2.3.1.94 from Saccharopolyspora erythraea
Q03131: 6-deoxyerythronolide-B synthase (subunit 3/3) (EC 2.3.1.94) from Saccharopolyspora erythraea

28% id,
9% cov

AMB_RS03860 amb0752 WP_011383195.1: NADPH:quinone oxidoreductase family protein
is similar to:
PaperBLAST

ERYA2_SACER / Q03132: 6-deoxyerythronolide-B synthase EryA2, modules 3 and 4; DEBS 2; 6-deoxyerythronolide B synthase II; Erythronolide synthase; ORF B; EC 2.3.1.94 from Saccharopolyspora erythraea
Q03132: 6-deoxyerythronolide-B synthase (subunit 2/3) (EC 2.3.1.94) from Saccharopolyspora erythraea

34% id,
9% cov

AMB_RS07830 amb1550 WP_011383960.1: NADP-dependent oxidoreductase
is similar to:
PaperBLAST

ERYA2_SACER / Q03132: 6-deoxyerythronolide-B synthase EryA2, modules 3 and 4; DEBS 2; 6-deoxyerythronolide B synthase II; Erythronolide synthase; ORF B; EC 2.3.1.94 from Saccharopolyspora erythraea
Q03132: 6-deoxyerythronolide-B synthase (subunit 2/3) (EC 2.3.1.94) from Saccharopolyspora erythraea

36% id,
8% cov

AMB_RS23050 amb4555 WP_011386899.1: quinone oxidoreductase
is similar to:
PaperBLAST

ERYA2_SACER / Q03132: 6-deoxyerythronolide-B synthase EryA2, modules 3 and 4; DEBS 2; 6-deoxyerythronolide B synthase II; Erythronolide synthase; ORF B; EC 2.3.1.94 from Saccharopolyspora erythraea
Q03132: 6-deoxyerythronolide-B synthase (subunit 2/3) (EC 2.3.1.94) from Saccharopolyspora erythraea

36% id,
7% cov

AMB_RS10620 amb2105 WP_011384505.1: [acyl-carrier-protein] S-malonyltransferase
is similar to:
PaperBLAST

ERYA2_SACER / Q03132: 6-deoxyerythronolide-B synthase EryA2, modules 3 and 4; DEBS 2; 6-deoxyerythronolide B synthase II; Erythronolide synthase; ORF B; EC 2.3.1.94 from Saccharopolyspora erythraea
Q03132: 6-deoxyerythronolide-B synthase (subunit 2/3) (EC 2.3.1.94) from Saccharopolyspora erythraea

26% id,
9% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 10 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory