Searching in Paramagnetospirillum magneticum AMB-1 (GCF_000009985.1)
Found 35 curated entries in PaperBLAST's database that match '2.3.3.9' as complete word(s).
These curated entries have 22 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Paramagnetospirillum magneticum AMB-1, or try another query
| AMB_RS19980 amb3948 WP_011386303.1: CoA ester lyase is similar to: | PaperBLAST |
CLYBL_HUMAN / Q8N0X4: Citramalyl-CoA lyase, mitochondrial; (3S)-malyl-CoA thioesterase; Beta-methylmalate synthase; Citrate lyase subunit beta-like protein; Citrate lyase beta-like; Malate synthase; EC 4.1.3.25; EC 3.1.2.30; EC 2.3.3.-; EC 2.3.3.9 from Homo sapiens | 29% id, 86% cov |
CLYBL_MOUSE / Q8R4N0: Citramalyl-CoA lyase, mitochondrial; (3S)-malyl-CoA thioesterase; Beta-methylmalate synthase; Citrate lyase subunit beta-like protein, mitochondrial; Citrate lyase beta-like; Malate synthase; EC 4.1.3.25; EC 3.1.2.30; EC 2.3.3.-; EC 2.3.3.9 from Mus musculus | 28% id, 87% cov |
| AMB_RS20125 amb3977 WP_043745375.1: CoA ester lyase is similar to: | PaperBLAST |
CLYBL_MOUSE / Q8R4N0: Citramalyl-CoA lyase, mitochondrial; (3S)-malyl-CoA thioesterase; Beta-methylmalate synthase; Citrate lyase subunit beta-like protein, mitochondrial; Citrate lyase beta-like; Malate synthase; EC 4.1.3.25; EC 3.1.2.30; EC 2.3.3.-; EC 2.3.3.9 from Mus musculus | 26% id, 88% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 4356937-4357887 (frame +1) on NC_007626.1 Paramagnetospirillum magneticum AMB-1, complete sequence is similar to: | PaperBLAST |
CLYBL_HUMAN / Q8N0X4: Citramalyl-CoA lyase, mitochondrial; (3S)-malyl-CoA thioesterase; Beta-methylmalate synthase; Citrate lyase subunit beta-like protein; Citrate lyase beta-like; Malate synthase; EC 4.1.3.25; EC 3.1.2.30; EC 2.3.3.-; EC 2.3.3.9 from Homo sapiens | 29% id, 92% cov |
Lawrence Berkeley National Laboratory