Curated BLAST for Genomes

 

Curated BLAST

Searching in Magnetospirillum magneticum AMB-1 (GCF_000009985.1)

Found 173 curated entries in PaperBLAST's database that match '2.4.1.13'.

These curated entries have 110 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Magnetospirillum magneticum AMB-1, or try another query

AMB_RS06430 amb1267 WP_011383679.1: glycosyltransferase
is similar to:
PaperBLAST

SUS_ACICK / A0A059ZV61: Sucrose synthase; SuSyAc; EC 2.4.1.13 from Acidithiobacillus caldus
AIA55343.1: sucrose synthase (SuSyAc;Acaty_c1477) (EC 2.4.1.13)
A0A059ZV61: sucrose synthase (EC 2.4.1.13) from Acidithiobacillus caldus

25% id,
41% cov

A6LKE9: sucrose synthase (EC 2.4.1.13) from Thermosipho melanesiensis

24% id,
41% cov

SUS7_ORYSJ / Q7XNX6: Sucrose synthase 7; OsSUS7; Sucrose-UDP glucosyltransferase 7; EC 2.4.1.13 from Oryza sativa

27% id,
21% cov

More...

AMB_RS01345 amb0265 WP_011382712.1: glycosyltransferase family 1 protein
is similar to:
PaperBLAST

SUS_ACICK / A0A059ZV61: Sucrose synthase; SuSyAc; EC 2.4.1.13 from Acidithiobacillus caldus
AIA55343.1: sucrose synthase (SuSyAc;Acaty_c1477) (EC 2.4.1.13)
A0A059ZV61: sucrose synthase (EC 2.4.1.13) from Acidithiobacillus caldus

29% id,
31% cov

SUS_NITEU / Q820M5: Sucrose synthase; SuSyNe; EC 2.4.1.13 from Nitrosomonas europaea
CAD85125.1: sucrose synthase (Ss2;SuSyNe;NE1214) (EC 2.4.1.13)
Q820M5: sucrose synthase (EC 2.4.1.13) from Nitrosomonas europaea

32% id,
16% cov

SUS_THEVB / Q8DK23: Sucrose synthase; SuSyTe; EC 2.4.1.13 from Thermosynechococcus vestitus
BAC08600.1: ADP-Glc: sucrose synthase (SusA;Te-SuS;Tlr1047) (EC 2.4.1.13)

42% id,
5% cov

AMB_RS00510 amb0101 WP_070108643.1: glycosyltransferase family 1 protein
is similar to:
PaperBLAST

P49037: sucrose synthase (EC 2.4.1.13) from Solanum lycopersicum

26% id,
23% cov

CAD61188.1: sucrose synthase 4 (Sus4) (EC 2.4.1.13)
Q7Y078: sucrose synthase (EC 2.4.1.13) from Solanum tuberosum

26% id,
23% cov

AAA33841.1: sucrose synthase (Sus1;SuSy;SS16) (EC 2.4.1.13)

25% id,
23% cov

More...

AMB_RS17840 amb3527 WP_011385886.1: glycosyltransferase family 1 protein
is similar to:
PaperBLAST

SUS_ACICK / A0A059ZV61: Sucrose synthase; SuSyAc; EC 2.4.1.13 from Acidithiobacillus caldus
AIA55343.1: sucrose synthase (SuSyAc;Acaty_c1477) (EC 2.4.1.13)
A0A059ZV61: sucrose synthase (EC 2.4.1.13) from Acidithiobacillus caldus

32% id,
17% cov

SUS_NITEU / Q820M5: Sucrose synthase; SuSyNe; EC 2.4.1.13 from Nitrosomonas europaea
CAD85125.1: sucrose synthase (Ss2;SuSyNe;NE1214) (EC 2.4.1.13)
Q820M5: sucrose synthase (EC 2.4.1.13) from Nitrosomonas europaea

31% id,
15% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory