Curated BLAST for Genomes

 

Curated BLAST

Searching in Paramagnetospirillum magneticum AMB-1 (GCF_000009985.1)

Found 197 curated entries in PaperBLAST's database that match '2.4.2.1'.

These curated entries have 142 distinct sequences.

Running ublast with E ≤ 0.01

Found 19 relevant proteins in Paramagnetospirillum magneticum AMB-1, or try another query

hisG AMB_RS16910 amb3343 WP_231849089.1: ATP phosphoribosyltransferase
is similar to:		 PaperBLAST

AZOBR_RS19500: ATP phosphoribosyltransferase (EC 2.4.2.17) from Azospirillum brasilense

 81% id,
88% cov

Ga0059261_1280: ATP phosphoribosyltransferase (EC 2.4.2.17) from Sphingomonas koreensis

 71% id,
89% cov

HSERO_RS20350: ATP phosphoribosyltransferase (EC 2.4.2.17) from Herbaspirillum seropedicae

 46% id,
90% cov

More...

AMB_RS20840 amb4121 WP_011386470.1: S-methyl-5'-thioadenosine phosphorylase
is similar to:		 PaperBLAST

flB / Q1EMV9: 5'-fluoro-5'-deoxy-adenosine phosphorylase (EC 2.4.2.1) from Streptantibioticus cattleyicolor

 51% id,
94% cov

Q97W94: purine-nucleoside phosphorylase (EC 2.4.2.1); S-methyl-5'-thioadenosine phosphorylase (EC 2.4.2.28) from Saccharolobus solfataricus

 44% id,
100% cov

pnp / Q5JEQ6: adenosine phosphorylase (EC 2.4.2.1) from Thermococcus kodakarensis

 44% id,
96% cov

More...

trpD AMB_RS14410 amb2862 WP_011385239.1: anthranilate phosphoribosyltransferase
is similar to:		 PaperBLAST

TRPD_THET8 / Q5SH88: Anthranilate phosphoribosyltransferase; EC 2.4.2.18 from Thermus thermophilus
TRPD_THETH / P83827: Anthranilate phosphoribosyltransferase; EC 2.4.2.18 from Thermus thermophilus

 48% id,
98% cov

TRPD_XANCP / Q8PD71: Anthranilate phosphoribosyltransferase; EC 2.4.2.18 from Xanthomonas campestris

 44% id,
99% cov

TRPD_MYCTU / P9WFX5: Anthranilate phosphoribosyltransferase; EC 2.4.2.18 from Mycobacterium tuberculosis
A5U4M0: anthranilate phosphoribosyltransferase (EC 2.4.2.18) from Mycobacterium tuberculosis
P9WFX5: anthranilate phosphoribosyltransferase (EC 2.4.2.18) from Mycobacterium tuberculosis

 43% id,
91% cov

More...

purF AMB_RS10545 amb2089 WP_011384489.1: amidophosphoribosyltransferase
is similar to:		 PaperBLAST

PUR1_BACSU / P00497: Amidophosphoribosyltransferase; ATase; Glutamine phosphoribosylpyrophosphate amidotransferase; GPATase; EC 2.4.2.14 from Bacillus subtilis

 50% id,
95% cov

ASE2_ARATH / Q9STG9: Amidophosphoribosyltransferase 2, chloroplastic; AtATase2; AtPURF2; PRPP2; Glutamine phosphoribosylpyrophosphate amidotransferase 2; AtGPRAT2; Protein CHLOROPLAST IMPORT APPARATUS 1; Protein DIFFERENTIAL DEVELOPMENT OF VASCULAR ASSOCIATED CELLS; EC 2.4.2.14 from Arabidopsis thaliana
Q9STG9: amidophosphoribosyltransferase (EC 2.4.2.14) from Arabidopsis thaliana

 51% id,
83% cov

ASE3_ARATH / Q9T0J5: Amidophosphoribosyltransferase 3, chloroplastic; AtATase3; PRPP3; Glutamine phosphoribosylpyrophosphate amidotransferase 3; AtGPRAT3; EC 2.4.2.14 from Arabidopsis thaliana
Q9T0J5: amidophosphoribosyltransferase (EC 2.4.2.14) from Arabidopsis thaliana

 49% id,
87% cov

More...

nadC AMB_RS19655 amb3885 WP_011386239.1: carboxylating nicotinate-nucleotide diphosphorylase
is similar to:		 PaperBLAST

NADC_SALTY / P30012: Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Quinolinate phosphoribosyltransferase [decarboxylating]; QAPRTase; EC 2.4.2.19 from Salmonella typhimurium

 44% id,
99% cov

NADC_MYCTU / P9WJJ7: Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Quinolinate phosphoribosyltransferase [decarboxylating]; QAPRTase; EC 2.4.2.19 from Mycobacterium tuberculosis
P9WJJ7: nicotinate-nucleotide diphosphorylase (carboxylating) (EC 2.4.2.19) from Mycobacterium tuberculosis

 43% id,
98% cov

NADC_ECOLI / P30011: Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Quinolinate phosphoribosyltransferase [decarboxylating]; QAPRTase; EC 2.4.2.19 from Escherichia coli
NadC / b0109: quinolinate phosphoribosyltransferase (decarboxylating) (EC 2.4.2.19) from Escherichia coli
nadC: nicotinate-nucleotide diphosphorylase, carboxylating; EC 2.4.2.19 from Escherichia coli
nadC / P30011: quinolinate phosphoribosyltransferase (decarboxylating) (EC 2.4.2.19) from Escherichia coli

 44% id,
92% cov

More...

AMB_RS13770 amb2738 WP_011385117.1: nicotinate phosphoribosyltransferase
is similar to:		 PaperBLAST

NAMPT_HUMAN / P43490: Nicotinamide phosphoribosyltransferase; NAmPRTase; Nampt; Pre-B-cell colony-enhancing factor 1; Pre-B cell-enhancing factor; Visfatin; EC 2.4.2.12 from Homo sapiens
P43490: nicotinamide phosphoribosyltransferase (EC 2.4.2.12) from Homo sapiens

 45% id,
96% cov

NAMPT_MOUSE / Q99KQ4: Nicotinamide phosphoribosyltransferase; NAmPRTase; Nampt; Pre-B-cell colony-enhancing factor 1 homolog; PBEF; Visfatin; EC 2.4.2.12 from Mus musculus
Q99KQ4: nicotinamide phosphoribosyltransferase (EC 2.4.2.12) from Mus musculus

 44% id,
96% cov

NAMPT_RAT / Q80Z29: Nicotinamide phosphoribosyltransferase; NAmPRTase; Nampt; Pre-B-cell colony-enhancing factor 1 homolog; PBEF; Visfatin; EC 2.4.2.12 from Rattus norvegicus

 44% id,
96% cov

More...

AMB_RS06680 amb1314 WP_011383724.1: orotate phosphoribosyltransferase
is similar to:		 PaperBLAST

PYRE_RHILT / P42719: Orotate phosphoribosyltransferase; OPRT; OPRTase; EC 2.4.2.10 from Rhizobium leguminosarum

 47% id,
83% cov

Q8DTV2: orotate phosphoribosyltransferase (EC 2.4.2.10) from Streptococcus mutans

 37% id,
99% cov

PYRE_BACCL / P46534: Orotate phosphoribosyltransferase; OPRT; OPRTase; EC 2.4.2.10 from Bacillus caldolyticus

 34% id,
98% cov

More...

tpiA AMB_RS09205 amb1819 WP_011384224.1: triose-phosphate isomerase
is similar to:		 PaperBLAST

P00941: purine-nucleoside phosphorylase (EC 2.4.2.1) from Homo sapiens

 41% id,
95% cov

pgeF AMB_RS03060 amb0593 WP_011383036.1: peptidoglycan editing factor PgeF
is similar to:		 PaperBLAST

PURNU_ECOLI / P33644: Purine nucleoside phosphorylase YfiH; Adenosine deaminase YfiH; Polyphenol oxidase YfiH; S-methyl-5'-thioadenosine phosphorylase YfiH; EC 2.4.2.1; EC 3.5.4.4; EC 1.10.3.-; EC 2.4.2.28 from Escherichia coli
yfiH / P33644: purine nucleoside phosphorylase YfiH (EC 2.4.2.1; EC 2.4.2.28; EC 3.5.4.4; EC 1.10.3.2) from Escherichia coli

 38% id,
91% cov

PURNU_BACTN / Q89ZI8: Purine nucleoside phosphorylase BT_4389; Adenosine deaminase BT_4389; S-methyl-5'-thioadenosine phosphorylase BT_4389; EC 2.4.2.1; EC 3.5.4.4; EC 2.4.2.28 from Bacteroides thetaiotaomicron

 33% id,
97% cov

PURNU_UNKP / Q1EIR0: Adenosine deaminase RL5; Laccase RL5; Multicopper oxidase RL5; Polyphenol oxidase; Purine nucleoside phosphorylase RL5; S-methyl-5'-thioadenosine phosphorylase RL5; EC 3.5.4.4; EC 1.10.3.-; EC 2.4.2.1; EC 2.4.2.28 from Unknown prokaryotic

 33% id,
94% cov

More...

modD AMB_RS14865 amb2953 WP_011385330.1: ModD protein
is similar to:		 PaperBLAST

NADC_MYCTU / P9WJJ7: Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Quinolinate phosphoribosyltransferase [decarboxylating]; QAPRTase; EC 2.4.2.19 from Mycobacterium tuberculosis
P9WJJ7: nicotinate-nucleotide diphosphorylase (carboxylating) (EC 2.4.2.19) from Mycobacterium tuberculosis

 31% id,
90% cov

Q9X1X8: nicotinate-nucleotide diphosphorylase (carboxylating) (EC 2.4.2.19) from Thermotoga maritima

 27% id,
100% cov

Q5XBL7: nicotinate-nucleotide diphosphorylase (carboxylating) (EC 2.4.2.19) from Streptococcus pyogenes

 29% id,
88% cov

More...

glmS AMB_RS06500 amb1279 WP_011383691.1: glutamine--fructose-6-phosphate transaminase (isomerizing)
is similar to:		 PaperBLAST

PUR1_ECOLI / P0AG16: Amidophosphoribosyltransferase; ATase; Glutamine phosphoribosylpyrophosphate amidotransferase; GPATase; EC 2.4.2.14 from Escherichia coli
Ade / b2312: amidophosphoribosyltransferase (EC 2.4.2.14) from Escherichia coli
purF / P0AG16: amidophosphoribosyltransferase (EC 2.4.2.14) from Escherichia coli

 26% id,
67% cov

ASE2_ARATH / Q9STG9: Amidophosphoribosyltransferase 2, chloroplastic; AtATase2; AtPURF2; PRPP2; Glutamine phosphoribosylpyrophosphate amidotransferase 2; AtGPRAT2; Protein CHLOROPLAST IMPORT APPARATUS 1; Protein DIFFERENTIAL DEVELOPMENT OF VASCULAR ASSOCIATED CELLS; EC 2.4.2.14 from Arabidopsis thaliana
Q9STG9: amidophosphoribosyltransferase (EC 2.4.2.14) from Arabidopsis thaliana

 28% id,
56% cov

ASE1_ARATH / Q9SI61: Amidophosphoribosyltransferase 1, chloroplastic; AtATase1; PRPP1; Glutamine phosphoribosylpyrophosphate amidotransferase 1; AtGPRAT1; EC 2.4.2.14 from Arabidopsis thaliana
Q9SI61: amidophosphoribosyltransferase (EC 2.4.2.14) from Arabidopsis thaliana

 27% id,
55% cov

More...

AMB_RS14345 amb2849 WP_011385226.1: adenine phosphoribosyltransferase
is similar to:		 PaperBLAST

PYRE_RHILT / P42719: Orotate phosphoribosyltransferase; OPRT; OPRTase; EC 2.4.2.10 from Rhizobium leguminosarum

 27% id,
63% cov

AMB_RS18330 amb3621 WP_011385979.1: glycosyl transferase family protein
is similar to:		 PaperBLAST

TRPGD_SALTY / P00905: Bifunctional protein TrpGD; EC 4.1.3.27; EC 2.4.2.18 from Salmonella typhimurium

 26% id,
58% cov

TRPGD_ECOLI / P00904: Bifunctional protein TrpGD; EC 4.1.3.27; EC 2.4.2.18 from Escherichia coli
TrpD / b1263: anthranilate synthase subunit TrpD (EC 2.4.2.18; EC 4.1.3.27) from Escherichia coli
trpD / P00904: anthranilate synthase subunit TrpD (EC 2.4.2.18) from Escherichia coli

 26% id,
58% cov

AMB_RS14405 amb2861 WP_011385238.1: aminodeoxychorismate/anthranilate synthase component II
is similar to:		 PaperBLAST

TRPGD_ECOLI / P00904: Bifunctional protein TrpGD; EC 4.1.3.27; EC 2.4.2.18 from Escherichia coli
TrpD / b1263: anthranilate synthase subunit TrpD (EC 2.4.2.18; EC 4.1.3.27) from Escherichia coli
trpD / P00904: anthranilate synthase subunit TrpD (EC 2.4.2.18) from Escherichia coli

 40% id,
37% cov

TRPGD_SALTY / P00905: Bifunctional protein TrpGD; EC 4.1.3.27; EC 2.4.2.18 from Salmonella typhimurium

 40% id,
36% cov

asnB AMB_RS00530 amb0105 WP_011382552.1: asparagine synthase (glutamine-hydrolyzing)
is similar to:		 PaperBLAST

PUR1_BACSU / P00497: Amidophosphoribosyltransferase; ATase; Glutamine phosphoribosylpyrophosphate amidotransferase; GPATase; EC 2.4.2.14 from Bacillus subtilis

 28% id,
47% cov

AMB_RS14750 amb2930 WP_011385307.1: response regulator
is similar to:		 PaperBLAST

G4MT58: orotate phosphoribosyltransferase (EC 2.4.2.10) from Pyricularia oryzae

 31% id,
39% cov

asnB AMB_RS00215 amb0042 WP_011382489.1: asparagine synthase (glutamine-hydrolyzing)
is similar to:		 PaperBLAST

PUR1_BACSU / P00497: Amidophosphoribosyltransferase; ATase; Glutamine phosphoribosylpyrophosphate amidotransferase; GPATase; EC 2.4.2.14 from Bacillus subtilis

 27% id,
43% cov

ASE1_ARATH / Q9SI61: Amidophosphoribosyltransferase 1, chloroplastic; AtATase1; PRPP1; Glutamine phosphoribosylpyrophosphate amidotransferase 1; AtGPRAT1; EC 2.4.2.14 from Arabidopsis thaliana
Q9SI61: amidophosphoribosyltransferase (EC 2.4.2.14) from Arabidopsis thaliana

 29% id,
24% cov

asnB AMB_RS00600 amb0119 WP_011382566.1: asparagine synthase (glutamine-hydrolyzing)
is similar to:		 PaperBLAST

PUR1_BACSU / P00497: Amidophosphoribosyltransferase; ATase; Glutamine phosphoribosylpyrophosphate amidotransferase; GPATase; EC 2.4.2.14 from Bacillus subtilis

 27% id,
42% cov

AMB_RS08815 amb1741 WP_011384146.1: phage tail length tape measure family protein
is similar to:		 PaperBLAST

flB / Q1EMV9: 5'-fluoro-5'-deoxy-adenosine phosphorylase (EC 2.4.2.1) from Streptantibioticus cattleyicolor

 28% id,
35% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 15 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

3633418-3634086 (frame -1) on NC_007626.1 Paramagnetospirillum magneticum AMB-1, complete sequence
is similar to:		 PaperBLAST

AZOBR_RS19500: ATP phosphoribosyltransferase (EC 2.4.2.17) from Azospirillum brasilense
Also see hits to annotated proteins above

 79% id,
97% cov

Ga0059261_1280: ATP phosphoribosyltransferase (EC 2.4.2.17) from Sphingomonas koreensis
Also see hits to annotated proteins above

 70% id,
97% cov

HSERO_RS20350: ATP phosphoribosyltransferase (EC 2.4.2.17) from Herbaspirillum seropedicae
Also see hits to annotated proteins above

 47% id,
97% cov

More...

4524284-4525306 (frame +2) on NC_007626.1 Paramagnetospirillum magneticum AMB-1, complete sequence
is similar to:		 PaperBLAST

flB / Q1EMV9: 5'-fluoro-5'-deoxy-adenosine phosphorylase (EC 2.4.2.1) from Streptantibioticus cattleyicolor
Also see hits to annotated proteins above

 50% id,
98% cov

PNPH_HUMAN / P00491: Purine nucleoside phosphorylase; PNP; Inosine phosphorylase; Inosine-guanosine phosphorylase; EC 2.4.2.1 from Homo sapiens
PNP / P00491: purine nucleoside phosphorylase subunit (EC 2.4.2.1; EC 2.4.2.15) from Homo sapiens
P00491: purine-nucleoside phosphorylase (EC 2.4.2.1) from Homo sapiens
Also see hits to annotated proteins above

 23% id,
93% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory