Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Paramagnetospirillum magneticum AMB-1 (GCF_000009985.1)

Found 39 curated entries in PaperBLAST's database that match '2.4.2.17' as complete word(s).

These curated entries have 33 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Paramagnetospirillum magneticum AMB-1, or try another query

hisG AMB_RS16910 amb3343 WP_231849089.1: ATP phosphoribosyltransferase is similar to:	PaperBLAST
AZOBR_RS19500: ATP phosphoribosyltransferase (EC 2.4.2.17) from Azospirillum brasilense	81% id, 88% cov
Ga0059261_1280: ATP phosphoribosyltransferase (EC 2.4.2.17) from Sphingomonas koreensis	71% id, 89% cov
HSERO_RS20350: ATP phosphoribosyltransferase (EC 2.4.2.17) from Herbaspirillum seropedicae	46% id, 90% cov
BPHYT_RS17715: ATP phosphoribosyltransferase (EC 2.4.2.17) from Burkholderia phytofirmans	47% id, 84% cov
HP15_2429: ATP phosphoribosyltransferase (EC 2.4.2.17) from Marinobacter adhaerens	44% id, 89% cov
PS417_04415: ATP phosphoribosyltransferase (EC 2.4.2.17) from Pseudomonas simiae	43% id, 90% cov
AO353_05115: ATP phosphoribosyltransferase (EC 2.4.2.17) from Pseudomonas fluorescens	43% id, 90% cov
PfGW456L13_5001: ATP phosphoribosyltransferase (EC 2.4.2.17) from Pseudomonas fluorescens	43% id, 90% cov
Pf1N1B4_1067: ATP phosphoribosyltransferase (EC 2.4.2.17) from Pseudomonas fluorescens	43% id, 90% cov
Pf6N2E2_3253: ATP phosphoribosyltransferase (EC 2.4.2.17) from Pseudomonas fluorescens	43% id, 90% cov
AO356_06970: ATP phosphoribosyltransferase (EC 2.4.2.17) from Pseudomonas fluorescens	43% id, 90% cov
Psest_3299: ATP phosphoribosyltransferase (EC 2.4.2.17) from Pseudomonas stutzeri	42% id, 90% cov
PP_0965: ATP phosphoribosyltransferase (EC 2.4.2.17) from Pseudomonas putida	42% id, 90% cov
Q4FQF7: ATP phosphoribosyltransferase (EC 2.4.2.17) from Psychrobacter arcticus	42% id, 82% cov
Q02129: ATP phosphoribosyltransferase (EC 2.4.2.17) from Lactococcus lactis	38% id, 78% cov
HIS1_SALTY / P00499: ATP phosphoribosyltransferase; ATP-PRT; ATP-PRTase; EC 2.4.2.17 from Salmonella typhimurium	42% id, 56% cov
HIS1_ECOLI / P60757: ATP phosphoribosyltransferase; ATP-PRT; ATP-PRTase; EC 2.4.2.17 from Escherichia coli HisG / b2019: ATP phosphoribosyltransferase (EC 2.4.2.17) from Escherichia coli hisG / P60757: ATP phosphoribosyltransferase (EC 2.4.2.17) from Escherichia coli	41% id, 56% cov
Q9PM78: ATP phosphoribosyltransferase (EC 2.4.2.17) from Campylobacter jejuni Q5HSJ4: ATP phosphoribosyltransferase (EC 2.4.2.17) from Campylobacter jejuni	38% id, 56% cov
Q9Z472: ATP phosphoribosyltransferase (EC 2.4.2.17) from Corynebacterium glutamicum	33% id, 64% cov
SMc00917: ATP phosphoribosyltransferase (EC 2.4.2.17) from Sinorhizobium meliloti	33% id, 63% cov
his1 / RF\|NP_594525.1: ATP phosphoribosyltransferase; EC 2.4.2.17 from Schizosaccharomyces pombe	28% id, 63% cov
HIS1 / GB\|CAA58751.1: ATP phosphoribosyltransferase; EC 2.4.2.17 from Candida albicans	30% id, 57% cov
CCNA_03626: ATP phosphoribosyltransferase (EC 2.4.2.17) from Caulobacter crescentus	31% id, 56% cov
G7JFL4: ATP phosphoribosyltransferase (EC 2.4.2.17) from Medicago truncatula	31% id, 52% cov
Q56UT3: ATP phosphoribosyltransferase (EC 2.4.2.17) from Odontarrhena lesbiaca	31% id, 49% cov
Q56UT2: ATP phosphoribosyltransferase (EC 2.4.2.17) from Odontarrhena lesbiaca	31% id, 47% cov
Q56US5: ATP phosphoribosyltransferase (EC 2.4.2.17) from Alyssum montanum	31% id, 47% cov
HIS1A_ARATH / Q9S762: ATP phosphoribosyltransferase 1, chloroplastic; ATP-PRTase 1; AtATP-PRT1; EC 2.4.2.17 from Arabidopsis thaliana AtATP-PRT1 / Q9S762: ATP-phosphoribosyl transferase (EC 2.4.2.17) from Arabidopsis thaliana Q9S762: ATP phosphoribosyltransferase (EC 2.4.2.17) from Arabidopsis thaliana	31% id, 47% cov
HIS1_MYCTU / P9WMN1: ATP phosphoribosyltransferase; ATP-PRT; ATP-PRTase; EC 2.4.2.17 from Mycobacterium tuberculosis	28% id, 51% cov
HIS1B_ARATH / Q8GSJ1: ATP phosphoribosyltransferase 2, chloroplastic; ATP-PRTase 2; AtATP-PRT2; EC 2.4.2.17 from Arabidopsis thaliana AtATP-PRT2 / Q8GSJ1: ATP-phosphoribosyl transferase (EC 2.4.2.17) from Arabidopsis thaliana	30% id, 46% cov
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The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

3633418-3634086 (frame -1) on NC_007626.1 Paramagnetospirillum magneticum AMB-1, complete sequence is similar to:	PaperBLAST
AZOBR_RS19500: ATP phosphoribosyltransferase (EC 2.4.2.17) from Azospirillum brasilense Also see hits to annotated proteins above	79% id, 97% cov
Ga0059261_1280: ATP phosphoribosyltransferase (EC 2.4.2.17) from Sphingomonas koreensis Also see hits to annotated proteins above	70% id, 97% cov
HSERO_RS20350: ATP phosphoribosyltransferase (EC 2.4.2.17) from Herbaspirillum seropedicae Also see hits to annotated proteins above	47% id, 97% cov
BPHYT_RS17715: ATP phosphoribosyltransferase (EC 2.4.2.17) from Burkholderia phytofirmans Also see hits to annotated proteins above	48% id, 93% cov
HP15_2429: ATP phosphoribosyltransferase (EC 2.4.2.17) from Marinobacter adhaerens Also see hits to annotated proteins above	45% id, 96% cov
PS417_04415: ATP phosphoribosyltransferase (EC 2.4.2.17) from Pseudomonas simiae Also see hits to annotated proteins above	45% id, 96% cov
PfGW456L13_5001: ATP phosphoribosyltransferase (EC 2.4.2.17) from Pseudomonas fluorescens Also see hits to annotated proteins above	45% id, 96% cov
AO353_05115: ATP phosphoribosyltransferase (EC 2.4.2.17) from Pseudomonas fluorescens Also see hits to annotated proteins above	45% id, 96% cov
Pf1N1B4_1067: ATP phosphoribosyltransferase (EC 2.4.2.17) from Pseudomonas fluorescens Also see hits to annotated proteins above	45% id, 96% cov
Pf6N2E2_3253: ATP phosphoribosyltransferase (EC 2.4.2.17) from Pseudomonas fluorescens Also see hits to annotated proteins above	45% id, 96% cov
AO356_06970: ATP phosphoribosyltransferase (EC 2.4.2.17) from Pseudomonas fluorescens Also see hits to annotated proteins above	45% id, 96% cov
Psest_3299: ATP phosphoribosyltransferase (EC 2.4.2.17) from Pseudomonas stutzeri Also see hits to annotated proteins above	44% id, 97% cov
PP_0965: ATP phosphoribosyltransferase (EC 2.4.2.17) from Pseudomonas putida Also see hits to annotated proteins above	44% id, 96% cov
Q4FQF7: ATP phosphoribosyltransferase (EC 2.4.2.17) from Psychrobacter arcticus Also see hits to annotated proteins above	43% id, 88% cov
Q02129: ATP phosphoribosyltransferase (EC 2.4.2.17) from Lactococcus lactis Also see hits to annotated proteins above	36% id, 98% cov
SMc00917: ATP phosphoribosyltransferase (EC 2.4.2.17) from Sinorhizobium meliloti Also see hits to annotated proteins above	33% id, 82% cov
HIS1_SALTY / P00499: ATP phosphoribosyltransferase; ATP-PRT; ATP-PRTase; EC 2.4.2.17 from Salmonella typhimurium Also see hits to annotated proteins above	39% id, 66% cov
HIS1_ECOLI / P60757: ATP phosphoribosyltransferase; ATP-PRT; ATP-PRTase; EC 2.4.2.17 from Escherichia coli HisG / b2019: ATP phosphoribosyltransferase (EC 2.4.2.17) from Escherichia coli hisG / P60757: ATP phosphoribosyltransferase (EC 2.4.2.17) from Escherichia coli Also see hits to annotated proteins above	38% id, 68% cov
Q9PM78: ATP phosphoribosyltransferase (EC 2.4.2.17) from Campylobacter jejuni Q5HSJ4: ATP phosphoribosyltransferase (EC 2.4.2.17) from Campylobacter jejuni Also see hits to annotated proteins above	36% id, 66% cov
Q9Z472: ATP phosphoribosyltransferase (EC 2.4.2.17) from Corynebacterium glutamicum Also see hits to annotated proteins above	33% id, 69% cov
HIS1 / GB\|CAA58751.1: ATP phosphoribosyltransferase; EC 2.4.2.17 from Candida albicans Also see hits to annotated proteins above	30% id, 67% cov
CCNA_03626: ATP phosphoribosyltransferase (EC 2.4.2.17) from Caulobacter crescentus Also see hits to annotated proteins above	28% id, 69% cov
G7JFL4: ATP phosphoribosyltransferase (EC 2.4.2.17) from Medicago truncatula Also see hits to annotated proteins above	28% id, 64% cov
HIS1_MYCTU / P9WMN1: ATP phosphoribosyltransferase; ATP-PRT; ATP-PRTase; EC 2.4.2.17 from Mycobacterium tuberculosis Also see hits to annotated proteins above	27% id, 65% cov
his1 / RF\|NP_594525.1: ATP phosphoribosyltransferase; EC 2.4.2.17 from Schizosaccharomyces pombe Also see hits to annotated proteins above	27% id, 65% cov
Q56UT3: ATP phosphoribosyltransferase (EC 2.4.2.17) from Odontarrhena lesbiaca Also see hits to annotated proteins above	29% id, 60% cov
Q56UT2: ATP phosphoribosyltransferase (EC 2.4.2.17) from Odontarrhena lesbiaca Also see hits to annotated proteins above	29% id, 60% cov
Q56US5: ATP phosphoribosyltransferase (EC 2.4.2.17) from Alyssum montanum Also see hits to annotated proteins above	28% id, 60% cov
HIS1A_ARATH / Q9S762: ATP phosphoribosyltransferase 1, chloroplastic; ATP-PRTase 1; AtATP-PRT1; EC 2.4.2.17 from Arabidopsis thaliana AtATP-PRT1 / Q9S762: ATP-phosphoribosyl transferase (EC 2.4.2.17) from Arabidopsis thaliana Q9S762: ATP phosphoribosyltransferase (EC 2.4.2.17) from Arabidopsis thaliana Also see hits to annotated proteins above	28% id, 59% cov
HIS1B_ARATH / Q8GSJ1: ATP phosphoribosyltransferase 2, chloroplastic; ATP-PRTase 2; AtATP-PRT2; EC 2.4.2.17 from Arabidopsis thaliana AtATP-PRT2 / Q8GSJ1: ATP-phosphoribosyl transferase (EC 2.4.2.17) from Arabidopsis thaliana Also see hits to annotated proteins above	27% id, 59% cov
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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory