Searching in Paramagnetospirillum magneticum AMB-1 (GCF_000009985.1)
Found 66 curated entries in PaperBLAST's database that match '2.4.2.4'.
These curated entries have 40 distinct sequences.
Running ublast with E ≤ 0.01
Found 4 relevant proteins in Paramagnetospirillum magneticum AMB-1, or try another query
AMB_RS20840 amb4121 WP_011386470.1: S-methyl-5'-thioadenosine phosphorylase is similar to: | PaperBLAST |
MTIP_PSEAE / Q9HZK1: S-methyl-5'-thioinosine phosphorylase; 5'-methylthioinosine phosphorylase; MTI phosphorylase; MTIP; EC 2.4.2.44 from Pseudomonas aeruginosa | 37% id, 84% cov |
AMB_RS01330 amb0262 WP_043743104.1: glycosyltransferase family 39 protein is similar to: | PaperBLAST |
ARNT_SALTY / O52327: Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase; 4-amino-4-deoxy-L-arabinose lipid A transferase; Lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase; Polymyxin resistance protein PmrK; Undecaprenyl phosphate-alpha-L-Ara4N transferase; EC 2.4.2.43 from Salmonella typhimurium | 24% id, 87% cov |
AAL34393.1: 4-amino-4-deoxy-L-arabinotransferase (ArnT) (EC 2.4.2.43) | 24% id, 86% cov |
AMB_RS03090 amb0599 WP_011383042.1: tRNA guanosine(34) transglycosylase Tgt is similar to: | PaperBLAST |
Q8THU2: tRNA-guanosine34 preQ1 transglycosylase (subunit 2/2) (EC 2.4.2.29); tRNA-guanine15 transglycosylase (EC 2.4.2.48) from Methanosarcina acetivorans | 29% id, 66% cov |
ATGT_HALVD / Q9C4M3: tRNA-guanine(15) transglycosylase; 7-cyano-7-deazaguanine tRNA-ribosyltransferase; Archaeal tRNA-guanine transglycosylase; EC 2.4.2.48 from Haloferax volcanii | 28% id, 64% cov |
Q9HI54: tRNA-guanine15 transglycosylase (EC 2.4.2.48) from Thermoplasma acidophilum | 27% id, 51% cov |
AMB_RS09155 amb1809 WP_083763488.1: divergent polysaccharide deacetylase family protein is similar to: | PaperBLAST |
GXLT2_HUMAN / A0PJZ3: Glucoside xylosyltransferase 2; Glycosyltransferase 8 domain-containing protein 4; EC 2.4.2.42 from Homo sapiens | 30% id, 24% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 6 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
4315598-4316152 (frame -3) on NC_007626.1 Magnetospirillum magneticum AMB-1 DNA, complete genome is similar to: | PaperBLAST |
GXLT2_HUMAN / A0PJZ3: Glucoside xylosyltransferase 2; Glycosyltransferase 8 domain-containing protein 4; EC 2.4.2.42 from Homo sapiens | 36% id, 21% cov |
92947-93141 (frame -1) on NC_007626.1 Magnetospirillum magneticum AMB-1 DNA, complete genome is similar to: | PaperBLAST |
AFTD_MYCS2 / A0QPD4: Alpha-(1->3)-arabinofuranosyltransferase; Arabinofuranan 3-O-arabinosyltransferase; EC 2.4.2.47 from Mycolicibacterium smegmatis | 55% id, 2% cov |
Lawrence Berkeley National Laboratory