Curated BLAST for Genomes

 

Curated BLAST

Searching in Paramagnetospirillum magneticum AMB-1 (GCF_000009985.1)

Found 103 curated entries in PaperBLAST's database that match '2.6.1.1' as complete word(s).

These curated entries have 76 distinct sequences.

Running ublast with E ≤ 0.01

Found 15 relevant proteins in Paramagnetospirillum magneticum AMB-1, or try another query

AMB_RS02875 amb0555 WP_011382998.1: pyridoxal phosphate-dependent aminotransferase
is similar to:		 PaperBLAST

AAPAT_RHIME / Q02635: Aspartate/prephenate aminotransferase; AspAT / PAT; Transaminase A; EC 2.6.1.1; EC 2.6.1.79 from Rhizobium meliloti
Q02635: aspartate transaminase (EC 2.6.1.1); aspartate-prephenate aminotransferase (EC 2.6.1.78); glutamate-prephenate aminotransferase (EC 2.6.1.79) from Sinorhizobium meliloti

 68% id,
100% cov

AAPAT_CERS1 / A3PMF8: Aspartate/prephenate aminotransferase; AspAT / PAT; EC 2.6.1.1; EC 2.6.1.79 from Cereibacter sphaeroides

 65% id,
100% cov

AAT_RHIME / P58350: Aspartate aminotransferase; AAT; AspAT; Putative 2-aminoadipate transaminase; Transaminase A; EC 2.6.1.1; EC 2.6.1.39 from Rhizobium meliloti

 58% id,
97% cov

More...

AMB_RS16135 amb3194 WP_011385559.1: phosphoserine transaminase
is similar to:		 PaperBLAST

serC / Q8TNI1: phosphoserine aminotransferase monomer (EC 2.6.1.52; EC 2.6.1.1) from Methanosarcina acetivorans

 62% id,
100% cov

AMB_RS18860 amb3727 WP_011386083.1: LL-diaminopimelate aminotransferase
is similar to:		 PaperBLAST

Q8YTF2: aspartate transaminase (EC 2.6.1.1) from Nostoc sp.

 43% id,
94% cov

Q8YUK5: aspartate transaminase (EC 2.6.1.1) from Nostoc sp.

 36% id,
99% cov

AAPAT_THET8 / Q56232: Aspartate/prephenate aminotransferase; AspAT / PAT; Transaminase A; EC 2.6.1.1; EC 2.6.1.78 from Thermus thermophilus
aspC / RF|YP_143312.1: aspartate transaminase; EC 2.6.1.1 from Thermus thermophilus

 32% id,
98% cov

More...

AMB_RS02850 amb0551 WP_043743277.1: branched-chain amino acid aminotransferase
is similar to:		 PaperBLAST

IlvE / b3770: branched-chain-amino-acid aminotransferase (EC 2.6.1.1; EC 2.6.1.57; EC 2.6.1.27; EC 2.6.1.42; EC 2.6.1.6) from Escherichia coli
ilvE / P0AB80: branched-chain-amino-acid aminotransferase (EC 2.6.1.1; EC 2.6.1.42; EC 2.6.1.6) from Escherichia coli

 41% id,
84% cov

AMB_RS22510 amb4448 WP_011386792.1: alanine--glyoxylate aminotransferase family protein
is similar to:		 PaperBLAST

serC / Q58369: phosphoserine aminotransferase monomer (EC 2.6.1.1; EC 2.6.1.52) from Methanocaldococcus jannaschii

 36% id,
93% cov

hisC AMB_RS20110 amb3974 WP_011386328.1: histidinol-phosphate transaminase
is similar to:		 PaperBLAST

hisC / P17731: histidinol-phosphate aminotransferase; tyrosine/phenylalanine aminotransferase (promiscuous) (EC 2.6.1.1; EC 2.6.1.9) from Bacillus subtilis

 33% id,
98% cov

Q8YMS6: aspartate transaminase (EC 2.6.1.1) from Nostoc sp.

 25% id,
88% cov

AAPAT_CHLTE / Q8KDS8: Aspartate/prephenate aminotransferase; AspAT / PAT; EC 2.6.1.1; EC 2.6.1.78 from Chlorobaculum tepidum

 25% id,
88% cov

More...

AMB_RS07030 amb1390 WP_043743690.1: aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
is similar to:		 PaperBLAST

AAPAT_THET8 / Q56232: Aspartate/prephenate aminotransferase; AspAT / PAT; Transaminase A; EC 2.6.1.1; EC 2.6.1.78 from Thermus thermophilus
aspC / RF|YP_143312.1: aspartate transaminase; EC 2.6.1.1 from Thermus thermophilus

 32% id,
97% cov

Q8YMS6: aspartate transaminase (EC 2.6.1.1) from Nostoc sp.

 31% id,
98% cov

aspC / GB|CAA63799.1: aspartate transaminase; EC 2.6.1.1 from Geobacillus stearothermophilus

 31% id,
98% cov

More...

AMB_RS12385 amb2464 WP_011384845.1: alanine--glyoxylate aminotransferase family protein
is similar to:		 PaperBLAST

serC / Q58369: phosphoserine aminotransferase monomer (EC 2.6.1.1; EC 2.6.1.52) from Methanocaldococcus jannaschii

 32% id,
95% cov

AMB_RS04060 amb0794 WP_011383237.1: pyridoxal phosphate-dependent aminotransferase
is similar to:		 PaperBLAST

Q8YMS6: aspartate transaminase (EC 2.6.1.1) from Nostoc sp.

 29% id,
99% cov

AAPAT_THET8 / Q56232: Aspartate/prephenate aminotransferase; AspAT / PAT; Transaminase A; EC 2.6.1.1; EC 2.6.1.78 from Thermus thermophilus
aspC / RF|YP_143312.1: aspartate transaminase; EC 2.6.1.1 from Thermus thermophilus

 29% id,
97% cov

AAT_THEMA / Q9X0Y2: Aspartate aminotransferase; AspAT; Transaminase A; EC 2.6.1.1 from Thermotoga maritima

 29% id,
93% cov

More...

AMB_RS03565 amb0694 WP_043743334.1: aminotransferase
is similar to:		 PaperBLAST

AAPAT_THET8 / Q56232: Aspartate/prephenate aminotransferase; AspAT / PAT; Transaminase A; EC 2.6.1.1; EC 2.6.1.78 from Thermus thermophilus
aspC / RF|YP_143312.1: aspartate transaminase; EC 2.6.1.1 from Thermus thermophilus

 31% id,
91% cov

AAT_RHIME / P58350: Aspartate aminotransferase; AAT; AspAT; Putative 2-aminoadipate transaminase; Transaminase A; EC 2.6.1.1; EC 2.6.1.39 from Rhizobium meliloti

 30% id,
95% cov

aspC / GB|CAA63799.1: aspartate transaminase; EC 2.6.1.1 from Geobacillus stearothermophilus

 29% id,
99% cov

More...

cobD AMB_RS19300 WP_043747053.1: threonine-phosphate decarboxylase CobD
is similar to:		 PaperBLAST

hisC / P17731: histidinol-phosphate aminotransferase; tyrosine/phenylalanine aminotransferase (promiscuous) (EC 2.6.1.1; EC 2.6.1.9) from Bacillus subtilis

 26% id,
83% cov

AMB_RS00655 amb0130 WP_011382577.1: histidinol-phosphate transaminase
is similar to:		 PaperBLAST

hisC / P17731: histidinol-phosphate aminotransferase; tyrosine/phenylalanine aminotransferase (promiscuous) (EC 2.6.1.1; EC 2.6.1.9) from Bacillus subtilis

 26% id,
74% cov

AAT_MUSP7 / C6C2Z3: Aspartate aminotransferase; AAT; AspAT; EC 2.6.1.1 from Musicola paradisiaca

 24% id,
74% cov

AMB_RS06965 amb1376 WP_043743673.1: PLP-dependent aminotransferase family protein
is similar to:		 PaperBLAST

atrD / B7STY2: L-tyrosine:2-oxoglutarate aminotransferase (EC 2.6.1.1) from Tapinella panuoides

 28% id,
46% cov

ARO9 / P38840: aromatic amino acid aminotransferase II (EC 2.6.1.1; EC 2.6.1.58; EC 2.6.1.28) from Saccharomyces cerevisiae

 22% id,
56% cov

AMB_RS00380 amb0075 WP_043742996.1: DegT/DnrJ/EryC1/StrS family aminotransferase
is similar to:		 PaperBLAST

AAPAT_NITEU / Q82WA8: Aspartate/prephenate aminotransferase; AspAT / PAT; EC 2.6.1.1; EC 2.6.1.79 from Nitrosomonas europaea

 35% id,
24% cov

AMB_RS00640 amb0127 WP_011382574.1: DegT/DnrJ/EryC1/StrS family aminotransferase
is similar to:		 PaperBLAST

AAPAT_NITEU / Q82WA8: Aspartate/prephenate aminotransferase; AspAT / PAT; EC 2.6.1.1; EC 2.6.1.79 from Nitrosomonas europaea

 32% id,
24% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 15 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory