Searching in Paramagnetospirillum magneticum AMB-1 (GCF_000009985.1)
Found 15 curated entries in PaperBLAST's database that match '2.7.1.12' as complete word(s).
These curated entries have 10 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Paramagnetospirillum magneticum AMB-1, or try another query
| AMB_RS19870 amb3926 WP_050750826.1: shikimate kinase is similar to: | PaperBLAST |
IDNK / Q5T6J7: gluconokinase monomer (EC 2.7.1.12) from Homo sapiens | 26% id, 96% cov |
Q8NMT0: gluconokinase (EC 2.7.1.12) from Corynebacterium glutamicum | 31% id, 72% cov |
GntV / b4268: D-gluconate kinase, thermosensitive (EC 2.7.1.12) from Escherichia coli | 28% id, 36% cov |
| AMB_RS04555 amb0894 WP_011383336.1: TRAP transporter small permease is similar to: | PaperBLAST |
Psest_2123: fusion of gluconokinase (EC 2.7.1.12) and the small permease component of the D-gluconate TRAP transporter from Pseudomonas stutzeri | 29% id, 28% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 953990-954772 (frame -3) on NC_007626.1 Paramagnetospirillum magneticum AMB-1, complete sequence is similar to: | PaperBLAST |
Psest_2123: fusion of gluconokinase (EC 2.7.1.12) and the small permease component of the D-gluconate TRAP transporter from Pseudomonas stutzeri | 27% id, 34% cov |
Lawrence Berkeley National Laboratory