Curated BLAST for Genomes

 

Curated BLAST

Searching in Paramagnetospirillum magneticum AMB-1 (GCF_000009985.1)

Found 9 curated entries in PaperBLAST's database that match '2.7.1.144' as complete word(s).

These curated entries have 6 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Paramagnetospirillum magneticum AMB-1, or try another query

AMB_RS11635 amb2301 WP_011384698.1: ATP-dependent 6-phosphofructokinase
is similar to:
PaperBLAST

PFKA_MYCTU / P9WID7: ATP-dependent 6-phosphofructokinase; ATP-PFK; Phosphofructokinase; Phosphofructokinase A; Phosphohexokinase; Tagatose-6-phosphate kinase; EC 2.7.1.11; EC 2.7.1.144 from Mycobacterium tuberculosis

41% id,
94% cov

pfkA / P0A797: 6-phosphofructokinase subunit (EC 2.7.1.11; EC 2.7.1.144) from Escherichia coli

41% id,
93% cov

AMB_RS20600 amb4075 WP_011386426.1: 6-phosphofructokinase
is similar to:
PaperBLAST

PFKA_MYCTU / P9WID7: ATP-dependent 6-phosphofructokinase; ATP-PFK; Phosphofructokinase; Phosphofructokinase A; Phosphohexokinase; Tagatose-6-phosphate kinase; EC 2.7.1.11; EC 2.7.1.144 from Mycobacterium tuberculosis

28% id,
99% cov

pfkA / P0A797: 6-phosphofructokinase subunit (EC 2.7.1.11; EC 2.7.1.144) from Escherichia coli

26% id,
84% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory