Curated BLAST for Genomes

 

Curated BLAST

Searching in Magnetospirillum magneticum AMB-1 (GCF_000009985.1)

Found 83 curated entries in PaperBLAST's database that match '2.7.1.16'.

These curated entries have 49 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Magnetospirillum magneticum AMB-1, or try another query

AMB_RS03985 amb0778 WP_011383221.1: bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase
is similar to:
PaperBLAST

B4EB35: D-glycero-beta-D-manno-heptose-7-phosphate kinase (EC 2.7.1.167) from Burkholderia cepacia

49% id,
96% cov

HEPPK_BORBR / Q7WGU8: D-beta-D-heptose 7-phosphate kinase; D-beta-D-heptose 7-phosphotransferase; D-glycero-beta-D-manno-heptose-7-phosphate kinase; EC 2.7.1.167 from Bordetella bronchiseptica
Q7WGU8: D-glycero-beta-D-manno-heptose-7-phosphate kinase (EC 2.7.1.167) from Bordetella bronchiseptica

46% id,
97% cov

Q7CPR9: D-glycero-beta-D-manno-heptose-7-phosphate kinase (EC 2.7.1.167); D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase (EC 2.7.7.70) from Salmonella enterica

43% id,
96% cov

More...

AMB_RS11570 amb2288 WP_050750703.1: glycerate kinase
is similar to:
PaperBLAST

GCK_THEMA / Q9X1S1: D-glycerate 2-kinase; GCK; EC 2.7.1.165 from Thermotoga maritima
Q9X1S1: glycerate 2-kinase (EC 2.7.1.165) from Thermotoga maritima

40% id,
97% cov

GCK_PYRHO / O58231: Glycerate 2-kinase; GCK; 2-phosphoglycerate forming glycerate kinase; EC 2.7.1.165 from Pyrococcus horikoshii
O58231: glycerate 2-kinase (EC 2.7.1.165) from Pyrococcus horikoshii

42% id,
88% cov

Q703V9: glycerate 2-kinase (EC 2.7.1.165) from Thermoproteus tenax

33% id,
90% cov

More...

AMB_RS16015 amb3175 WP_011385540.1: glycerate kinase
is similar to:
PaperBLAST

GCK_PYRHO / O58231: Glycerate 2-kinase; GCK; 2-phosphoglycerate forming glycerate kinase; EC 2.7.1.165 from Pyrococcus horikoshii
O58231: glycerate 2-kinase (EC 2.7.1.165) from Pyrococcus horikoshii

40% id,
98% cov

GCK_THEMA / Q9X1S1: D-glycerate 2-kinase; GCK; EC 2.7.1.165 from Thermotoga maritima
Q9X1S1: glycerate 2-kinase (EC 2.7.1.165) from Thermotoga maritima

39% id,
99% cov

Q703V9: glycerate 2-kinase (EC 2.7.1.165) from Thermoproteus tenax

32% id,
95% cov

More...

AMB_RS21475 amb4248 WP_011386597.1: aminoglycoside phosphotransferase
is similar to:
PaperBLAST

amgK / Q88QT3: N-acetyl-D-muramate 1-kinase (EC 2.7.1.162; EC 2.7.1.221) from Pseudomonas putida

36% id,
93% cov

AMB_RS05485 amb1073 WP_011383486.1: kinase
is similar to:
PaperBLAST

HDDA_ANETH / Q9AGY8: D-glycero-alpha-D-manno-heptose 7-phosphate kinase; D-alpha-D-heptose 7-phosphate kinase; EC 2.7.1.168 from Aneurinibacillus thermoaerophilus
hddA / Q9AGY8: D-glycero-α-D-manno-heptose-7-phosphate kinase (EC 2.7.1.168) from Aneurinibacillus thermoaerophilus
Q9AGY8: D-glycero-alpha-D-manno-heptose-7-phosphate kinase (EC 2.7.1.168) from Aneurinibacillus thermoaerophilus

30% id,
93% cov

HDDA_MYCTU / O53637: D-glycero-alpha-D-manno-heptose 7-phosphate kinase; D-alpha-D-heptose 7-phosphate kinase; MtbHddA; EC 2.7.1.168 from Mycobacterium tuberculosis

30% id,
83% cov

AMB_RS00315 amb0062 WP_011382509.1: cytidyltransferase
is similar to:
PaperBLAST

Q7CPR9: D-glycero-beta-D-manno-heptose-7-phosphate kinase (EC 2.7.1.167); D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase (EC 2.7.7.70) from Salmonella enterica

33% id,
36% cov

HLDE_ECOLI / P76658: Bifunctional protein HldE; EC 2.7.1.167; EC 2.7.7.70 from Escherichia coli
HldE / b3052: fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase (EC 2.7.1.167; EC 2.7.7.70) from Escherichia coli
hldE / P76658: fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase (EC 2.7.1.167; EC 2.7.7.70) from Escherichia coli
P76658: D-glycero-beta-D-manno-heptose-7-phosphate kinase (EC 2.7.1.167); D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase (EC 2.7.7.70) from Escherichia coli

33% id,
36% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory