Curated BLAST for Genomes

 

Curated BLAST

Searching in Magnetospirillum magneticum AMB-1 (GCF_000009985.1)

Found 91 curated entries in PaperBLAST's database that match '2.7.1.17'.

These curated entries have 57 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Magnetospirillum magneticum AMB-1, or try another query

AMB_RS15285 amb3034 WP_011385410.1: anhydro-N-acetylmuramic acid kinase
is similar to:
PaperBLAST

ANMK_PSEPK / Q88QQ4: Anhydro-N-acetylmuramic acid kinase; AnhMurNAc kinase; EC 2.7.1.170 from Pseudomonas putida

40% id,
96% cov

ANMK_PSEAE / Q9I5Q5: Anhydro-N-acetylmuramic acid kinase; AnhMurNAc kinase; EC 2.7.1.170 from Pseudomonas aeruginosa
anmK / Q9I5Q5: anhydro-N-acetylmuramic acid kinase monomer (EC 2.7.1.170) from Pseudomonas aeruginosa
Q9I5Q5: anhydro-N-acetylmuramic acid kinase (EC 2.7.1.170) from Pseudomonas aeruginosa

38% id,
98% cov

Q8EHB5: anhydro-N-acetylmuramic acid kinase (EC 2.7.1.170) from Shewanella oneidensis

36% id,
97% cov

More...

AMB_RS21170 amb4184 WP_011386533.1: adenosine kinase
is similar to:
PaperBLAST

kdgK / P45416: 2-dehydro-3-deoxy-D-gluconate kinase (EC 2.7.1.178) from Dickeya dadantii

24% id,
88% cov

YhjI / b3526: 2-dehydro-3-deoxygluconokinase (EC 2.7.1.178; EC 2.7.1.45) from Escherichia coli
kdgK / P37647: 2-dehydro-3-deoxygluconokinase (EC 2.7.1.178) from Escherichia coli

27% id,
36% cov

AMB_RS20110 amb3974 WP_011386328.1: histidinol-phosphate aminotransferase
is similar to:
PaperBLAST

MmCobD / Q8PVB1: MmCobD (EC 4.1.1.81; EC 2.7.1.177) from Methanosarcina mazei

28% id,
70% cov

AMB_RS19300 WP_043747053.1: threonine-phosphate decarboxylase
is similar to:
PaperBLAST

MmCobD / Q8PVB1: MmCobD (EC 4.1.1.81; EC 2.7.1.177) from Methanosarcina mazei

26% id,
66% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory