Curated BLAST for Genomes


Curated BLAST

Searching in Paramagnetospirillum magneticum AMB-1 (GCF_000009985.1)

Found 41 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 33 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Paramagnetospirillum magneticum AMB-1, or try another query

AMB_RS14985 amb2976 WP_043744689.1: ROK family protein
is similar to:

Sama_2231: glucokinase (EC from Shewanella amazonensis

52% id,
99% cov

Sama_1405: glucokinase (EC from Shewanella amazonensis

51% id,
95% cov

B1VZT1: glucokinase (EC from Streptomyces griseus

32% id,
99% cov


glk AMB_RS10655 amb2112 WP_011384511.1: glucokinase
is similar to:

GLK_ECOLI / P0A6V8: Glucokinase; Glucose kinase; EC from Escherichia coli
Glk / b2388: glucokinase (EC; EC; EC from Escherichia coli

47% id,
96% cov

PS417_22685: Glucokinase (EC from Pseudomonas simiae

41% id,
98% cov

A0A3G4RI75: glucokinase (EC from Methylomonas methanica

33% id,
98% cov


The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory