Searching in Paramagnetospirillum magneticum AMB-1 (GCF_000009985.1)
Found 19 curated entries in PaperBLAST's database that match '2.7.1.39' as complete word(s).
These curated entries have 13 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Paramagnetospirillum magneticum AMB-1, or try another query
| AMB_RS03910 amb0763 WP_011383206.1: homoserine kinase is similar to: | PaperBLAST |
Ga0059261_3253: homoserine kinase (EC 2.7.1.39) from Sphingomonas koreensis | 45% id, 97% cov |
KHSE_PSEAE / P29364: Homoserine kinase; HK; HSK; EC 2.7.1.39 from Pseudomonas aeruginosa | 36% id, 97% cov |
| AMB_RS19870 amb3926 WP_050750826.1: shikimate kinase is similar to: | PaperBLAST |
thrB / B8DPL9: homoserine kinase (EC 2.7.1.39) from Desulfovibrio vulgaris | 30% id, 94% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 4338196-4338891 (frame -1) on NC_007626.1 Paramagnetospirillum magneticum AMB-1, complete sequence is similar to: | PaperBLAST |
thrB / B8DPL9: homoserine kinase (EC 2.7.1.39) from Desulfovibrio vulgaris | 30% id, 96% cov |
Lawrence Berkeley National Laboratory