Curated BLAST for Genomes


Curated BLAST

Searching in Paramagnetospirillum magneticum AMB-1 (GCF_000009985.1)

Found 21 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 16 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Paramagnetospirillum magneticum AMB-1, or try another query

AMB_RS05485 amb1073 WP_011383486.1: kinase
is similar to:

GAL1_PYRFU / Q9HHB6: Galactokinase; Galactose kinase; EC from Pyrococcus furiosus

26% id,
95% cov

GAL1_PYRHO / O58107: Galactokinase; Galactose kinase; EC from Pyrococcus horikoshii

26% id,
93% cov

Q9K3S8: galactokinase (EC from Streptomyces coelicolor

25% id,
64% cov


The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory