Curated BLAST for Genomes

 

Curated BLAST

Searching in Paramagnetospirillum magneticum AMB-1 (GCF_000009985.1)

Found 52 curated entries in PaperBLAST's database that match '2.7.1.8'.

These curated entries have 36 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Paramagnetospirillum magneticum AMB-1, or try another query

glk AMB_RS10655 amb2112 WP_011384511.1: glucokinase
is similar to:
PaperBLAST

Glk / b2388: glucokinase (EC 2.7.1.1; EC 2.7.1.2; EC 2.7.1.8) from Escherichia coli
glk / P0A6V8: glucokinase (EC 2.7.1.1; EC 2.7.1.8) from Escherichia coli

47% id,
96% cov

AMB_RS14985 amb2976 WP_043744689.1: ROK family protein
is similar to:
PaperBLAST

BGLK_LISMO / Q8Y3R9: Beta-glucoside kinase; EC 2.7.1.85 from Listeria monocytogenes

27% id,
95% cov

BGLK_LISIN / Q926Y3: Beta-glucoside kinase; EC 2.7.1.85 from Listeria innocua

25% id,
95% cov

AMB_RS00825 amb0162 WP_011382609.1: NAD kinase
is similar to:
PaperBLAST

POS5_SCHPO / Q9UT98: NADH kinase pos5, mitochondrial; EC 2.7.1.86 from Schizosaccharomyces pombe

27% id,
68% cov

C7GJD6: NADH kinase (EC 2.7.1.86) from Saccharomyces cerevisiae

31% id,
45% cov

POS5_YEAST / Q06892: NADH kinase POS5, mitochondrial; EC 2.7.1.86 from Saccharomyces cerevisiae
Q06892: NAD+ kinase (EC 2.7.1.23); NADH kinase (EC 2.7.1.86) from Saccharomyces cerevisiae

31% id,
45% cov

More...

AMB_RS21170 amb4184 WP_011386533.1: adenosine kinase
is similar to:
PaperBLAST

SM_b21217: glucosamine kinase (EC 2.7.1.8) from Sinorhizobium meliloti

33% id,
36% cov

AMB_RS16380 WP_043746822.1: carbohydrate kinase family protein
is similar to:
PaperBLAST

SM_b21217: glucosamine kinase (EC 2.7.1.8) from Sinorhizobium meliloti

43% id,
26% cov

AMB_RS00315 amb0062 WP_231848935.1: PfkB family carbohydrate kinase
is similar to:
PaperBLAST

SM_b21217: glucosamine kinase (EC 2.7.1.8) from Sinorhizobium meliloti

30% id,
23% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

3744365-3744523 (frame -3) on NC_007626.1 Paramagnetospirillum magneticum AMB-1, complete sequence
is similar to:
PaperBLAST

CHKA_HUMAN / P35790: Choline kinase alpha; CK; CHETK-alpha; Ethanolamine kinase; EK; EC 2.7.1.32; EC 2.7.1.82 from Homo sapiens

60% id,
4% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory