Curated BLAST for Genomes


Curated BLAST

Searching in Magnetospirillum magneticum AMB-1 (GCF_000009985.1)

Found 17 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 13 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Magnetospirillum magneticum AMB-1, or try another query

AMB_RS12860 amb2554 WP_011384935.1: acetate/propionate family kinase
is similar to:

PDUW_CITFR / B1VB81: Propionate kinase; EC from Citrobacter freundii

39% id,
98% cov

ackA / P71104: acetate kinase monomer (EC from Clostridium acetobutylicum

38% id,
99% cov

TDCD_ECOLI / P11868: Propionate kinase; EC from Escherichia coli
YhaA / b3115: propionate kinase (EC; EC; EC; EC from Escherichia coli

40% id,
95% cov


AMB_RS11140 amb2201 WP_011384599.1: 5-(carboxyamino)imidazole ribonucleotide synthase
is similar to:

PurT / b1849: phosphoribosylglycinamide formyltransferase 2 (EC; EC from Escherichia coli
purT / P33221: phosphoribosylglycinamide formyltransferase 2 (EC; EC from Escherichia coli

27% id,
91% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory