Curated BLAST for Genomes

 

Curated BLAST

Searching in Paramagnetospirillum magneticum AMB-1 (GCF_000009985.1)

Found 51 curated entries in PaperBLAST's database that match '2.7.7.9' as complete word(s).

These curated entries have 41 distinct sequences.

Running ublast with E ≤ 0.01

Found 10 relevant proteins in Paramagnetospirillum magneticum AMB-1, or try another query

AMB_RS02985 amb0577 WP_011383020.1: UTP--glucose-1-phosphate uridylyltransferase
is similar to:
PaperBLAST

A0A0W1QGK2: UTP-glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) from Sphingomonas sp.

61% id,
99% cov

A0A0H2X8N4: UTP-glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) from Xanthomonas campestris

52% id,
96% cov

Q8PK83: UTP-glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) from Xanthomonas citri

51% id,
96% cov

More...

AMB_RS22525 amb4451 WP_011386795.1: UTP--glucose-1-phosphate uridylyltransferase
is similar to:
PaperBLAST

A0A0W1QGK2: UTP-glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) from Sphingomonas sp.

57% id,
98% cov

A0A0H2X8N4: UTP-glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) from Xanthomonas campestris

53% id,
93% cov

Q8PK83: UTP-glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) from Xanthomonas citri

53% id,
92% cov

More...

AMB_RS00300 amb0059 WP_011382506.1: glucose-1-phosphate thymidylyltransferase
is similar to:
PaperBLAST

AGLF_HALVD / D4GYH1: UTP--glucose-1-phosphate uridylyltransferase AglF; Archaeal glycosylation protein F; EC 2.7.7.9 from Haloferax volcanii

32% id,
95% cov

S1PNA_SULTO / Q975F9: Bifunctional sugar-1-phosphate nucleotidylyltransferase/acetyltransferase; EC 2.7.7.24; EC 2.7.7.9; EC 2.7.7.83; EC 2.7.7.23; EC 2.3.1.276; EC 2.3.1.157 from Sulfurisphaera tokodaii
Q975F9: glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157); galactosamine-1-phosphate N-acetyltransferase (EC 2.3.1.276); UDP-N-acetylglucosamine diphosphorylase (EC 2.7.7.23); glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24); aldose-1-phosphate nucleotidyltransferase (EC 2.7.7.37); UDP-N-acetylgalactosamine diphosphorylase (EC 2.7.7.83); UTP-glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) from Sulfurisphaera tokodaii

28% id,
53% cov

AMB_RS00430 amb0085 WP_011382532.1: CBS domain-containing protein
is similar to:
PaperBLAST

AGLF_HALVD / D4GYH1: UTP--glucose-1-phosphate uridylyltransferase AglF; Archaeal glycosylation protein F; EC 2.7.7.9 from Haloferax volcanii

29% id,
96% cov

CUGP_SYNY3 / P74285: UTP--glucose-1-phosphate uridylyltransferase; Cyanobacterial UDP-glucose pyrophosphorylase; UDP-glucose pyrophosphorylase; UDP-Glc PPase; EC 2.7.7.9 from Synechocystis sp.
P74285: UTP-glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) from Synechocystis sp.

30% id,
62% cov

AMB_RS02980 amb0576 WP_011383019.1: UDP-glucose/GDP-mannose dehydrogenase family protein
is similar to:
PaperBLAST

Q8GQP9: UTP-glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) from Streptococcus equi

29% id,
88% cov

AMB_RS21470 amb4247 WP_050750831.1: nucleotidyltransferase family protein
is similar to:
PaperBLAST

AGLF_HALVD / D4GYH1: UTP--glucose-1-phosphate uridylyltransferase AglF; Archaeal glycosylation protein F; EC 2.7.7.9 from Haloferax volcanii

25% id,
95% cov

CUGP_SYNY3 / P74285: UTP--glucose-1-phosphate uridylyltransferase; Cyanobacterial UDP-glucose pyrophosphorylase; UDP-glucose pyrophosphorylase; UDP-Glc PPase; EC 2.7.7.9 from Synechocystis sp.
P74285: UTP-glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) from Synechocystis sp.

35% id,
24% cov

AMB_RS06505 amb1280 WP_043743620.1: bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase
is similar to:
PaperBLAST

AGLF_HALVD / D4GYH1: UTP--glucose-1-phosphate uridylyltransferase AglF; Archaeal glycosylation protein F; EC 2.7.7.9 from Haloferax volcanii

25% id,
88% cov

AMB_RS10645 amb2110 WP_011384509.1: glucose-1-phosphate adenylyltransferase
is similar to:
PaperBLAST

CUGP_SYNY3 / P74285: UTP--glucose-1-phosphate uridylyltransferase; Cyanobacterial UDP-glucose pyrophosphorylase; UDP-glucose pyrophosphorylase; UDP-Glc PPase; EC 2.7.7.9 from Synechocystis sp.
P74285: UTP-glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) from Synechocystis sp.

25% id,
62% cov

AMB_RS00610 amb0121 WP_043743030.1: glucose-1-phosphate cytidylyltransferase
is similar to:
PaperBLAST

CUGP_SYNY3 / P74285: UTP--glucose-1-phosphate uridylyltransferase; Cyanobacterial UDP-glucose pyrophosphorylase; UDP-glucose pyrophosphorylase; UDP-Glc PPase; EC 2.7.7.9 from Synechocystis sp.
P74285: UTP-glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) from Synechocystis sp.

24% id,
53% cov

AMB_RS00795 amb0156 WP_011382603.1: LPS biosynthesis protein
is similar to:
PaperBLAST

GALU_ECOLI / P0AEP3: UTP--glucose-1-phosphate uridylyltransferase; Alpha-D-glucosyl-1-phosphate uridylyltransferase; UDP-Glc PPase; UDP-glucose pyrophosphorylase; UDPGP; Uridine diphosphoglucose pyrophosphorylase; EC 2.7.7.9 from Escherichia coli
GALU_SHIFL / P0AEP6: UTP--glucose-1-phosphate uridylyltransferase; Alpha-D-glucosyl-1-phosphate uridylyltransferase; UDP-glucose pyrophosphorylase; UDPGP; Uridine diphosphoglucose pyrophosphorylase; EC 2.7.7.9 from Shigella flexneri
GalU / b1236: UTP—glucose-1-phosphate uridylyltransferase (EC 2.7.7.64; EC 2.7.7.9) from Escherichia coli
galU: UTP--glucose-1-phosphate uridylyltransferase; EC 2.7.7.9 from Escherichia coli

33% id,
16% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 8 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory