Curated BLAST for Genomes


Curated BLAST

Searching in Paramagnetospirillum magneticum AMB-1 (GCF_000009985.1)

Found 7 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 4 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Paramagnetospirillum magneticum AMB-1, or try another query

AMB_RS01290 amb0254 WP_011382701.1: amidohydrolase family protein
is similar to:

LIGI_COMTE / Q93PS7: 2-pyrone-4,6-dicarbaxylate hydrolase; PDC hydrolase; 2-pyrone-4,6-dicarboxylate lactonase; EC from Comamonas testosteroni
pmdD / Q93PS7: 2-pyrone-4,6-dicarboxylate hydrolase (EC from Comamonas testosteroni

87% id,
99% cov

proL / Q75T30: 2-pyrone-4,6-dicarboxylate hydrolase (EC from Pseudomonas straminea

87% id,
99% cov

D1MW98: 2-pyrone-4,6-dicarboxylate lactonase (EC from Comamonas sp.

86% id,
99% cov


The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory