Searching in Paramagnetospirillum magneticum AMB-1 (GCF_000009985.1)
Found 19 curated entries in PaperBLAST's database that match '3.1.2.4'.
These curated entries have 16 distinct sequences.
Running ublast with E ≤ 0.01
Found 16 relevant proteins in Paramagnetospirillum magneticum AMB-1, or try another query
| AMB_RS03265 amb0634 WP_011383077.1: enoyl-CoA hydratase is similar to: | PaperBLAST |
acuK / C8YX87: acryloyl-CoA hydratase/3-hydroxypropanoyl-CoA hydrolase (EC 3.1.2.4; EC 4.2.1.116) from Halomonas sp. | 54% id, 100% cov |
C3KM96: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Sinorhizobium fredii | 32% id, 62% cov |
HIBCH_HUMAN / Q6NVY1: 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial; 3-hydroxyisobutyryl-coenzyme A hydrolase; HIB-CoA hydrolase; HIBYL-CoA-H; EC 3.1.2.4 from Homo sapiens | 29% id, 68% cov |
| AMB_RS18135 amb3583 WP_043745113.1: enoyl-CoA hydratase/isomerase family protein is similar to: | PaperBLAST |
HIBCH_RAT / Q5XIE6: 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial; 3-hydroxyisobutyryl-coenzyme A hydrolase; HIB-CoA hydrolase; HIBYL-CoA-H; EC 3.1.2.4 from Rattus norvegicus | 46% id, 91% cov |
Pf1N1B4_4790: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Pseudomonas fluorescens | 41% id, 96% cov |
HIBCH_HUMAN / Q6NVY1: 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial; 3-hydroxyisobutyryl-coenzyme A hydrolase; HIB-CoA hydrolase; HIBYL-CoA-H; EC 3.1.2.4 from Homo sapiens | 43% id, 91% cov |
| AMB_RS13070 amb2597 WP_011384978.1: enoyl-CoA hydratase is similar to: | PaperBLAST |
acuK / C8YX87: acryloyl-CoA hydratase/3-hydroxypropanoyl-CoA hydrolase (EC 3.1.2.4; EC 4.2.1.116) from Halomonas sp. | 42% id, 100% cov |
| AMB_RS12890 amb2561 WP_011384942.1: enoyl-CoA hydratase/isomerase family protein is similar to: | PaperBLAST |
C3KM96: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Sinorhizobium fredii | 43% id, 94% cov |
HIBCH_RAT / Q5XIE6: 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial; 3-hydroxyisobutyryl-coenzyme A hydrolase; HIB-CoA hydrolase; HIBYL-CoA-H; EC 3.1.2.4 from Rattus norvegicus | 44% id, 91% cov |
PGA1_c17350: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Phaeobacter inhibens | 40% id, 97% cov |
| AMB_RS03470 amb0675 WP_011383118.1: enoyl-CoA hydratase/isomerase family protein is similar to: | PaperBLAST |
acuK / C8YX87: acryloyl-CoA hydratase/3-hydroxypropanoyl-CoA hydrolase (EC 3.1.2.4; EC 4.2.1.116) from Halomonas sp. | 32% id, 98% cov |
Psest_2439: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Pseudomonas stutzeri | 28% id, 74% cov |
RR42_RS28545: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Cupriavidus basilensis | 29% id, 50% cov |
| paaG AMB_RS00905 amb0178 WP_011382625.1: 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase PaaG is similar to: | PaperBLAST |
acuK / C8YX87: acryloyl-CoA hydratase/3-hydroxypropanoyl-CoA hydrolase (EC 3.1.2.4; EC 4.2.1.116) from Halomonas sp. | 31% id, 100% cov |
| AMB_RS13040 amb2591 WP_011384972.1: enoyl-CoA hydratase/isomerase family protein is similar to: | PaperBLAST |
acuK / C8YX87: acryloyl-CoA hydratase/3-hydroxypropanoyl-CoA hydrolase (EC 3.1.2.4; EC 4.2.1.116) from Halomonas sp. | 32% id, 95% cov |
PfGW456L13_2986: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Pseudomonas fluorescens | 27% id, 64% cov |
PGA1_c17350: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Phaeobacter inhibens | 29% id, 60% cov |
| AMB_RS10825 amb2142 WP_011384541.1: cyclohexa-1,5-dienecarbonyl-CoA hydratase is similar to: | PaperBLAST |
acuK / C8YX87: acryloyl-CoA hydratase/3-hydroxypropanoyl-CoA hydrolase (EC 3.1.2.4; EC 4.2.1.116) from Halomonas sp. | 29% id, 98% cov |
Psest_2439: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Pseudomonas stutzeri | 25% id, 59% cov |
PGA1_c17350: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Phaeobacter inhibens | 27% id, 51% cov |
| AMB_RS15050 amb2990 WP_011385366.1: 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein is similar to: | PaperBLAST |
acuK / C8YX87: acryloyl-CoA hydratase/3-hydroxypropanoyl-CoA hydrolase (EC 3.1.2.4; EC 4.2.1.116) from Halomonas sp. | 35% id, 77% cov |
Psest_2439: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Pseudomonas stutzeri | 27% id, 50% cov |
| AMB_RS13030 amb2589 WP_011384970.1: enoyl-CoA hydratase family protein is similar to: | PaperBLAST |
acuK / C8YX87: acryloyl-CoA hydratase/3-hydroxypropanoyl-CoA hydrolase (EC 3.1.2.4; EC 4.2.1.116) from Halomonas sp. | 26% id, 96% cov |
| scpB AMB_RS11335 amb2242 WP_043744278.1: methylmalonyl-CoA decarboxylase is similar to: | PaperBLAST |
acuK / C8YX87: acryloyl-CoA hydratase/3-hydroxypropanoyl-CoA hydrolase (EC 3.1.2.4; EC 4.2.1.116) from Halomonas sp. | 25% id, 97% cov |
Pf1N1B4_4790: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Pseudomonas fluorescens | 22% id, 76% cov |
PS417_13835: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Pseudomonas simiae | 25% id, 44% cov |
| boxC AMB_RS00885 amb0174 WP_011382621.1: 2,3-epoxybenzoyl-CoA dihydrolase is similar to: | PaperBLAST |
acuK / C8YX87: acryloyl-CoA hydratase/3-hydroxypropanoyl-CoA hydrolase (EC 3.1.2.4; EC 4.2.1.116) from Halomonas sp. | 30% id, 66% cov |
| AMB_RS03645 amb0710 WP_043743342.1: enoyl-CoA hydratase-related protein is similar to: | PaperBLAST |
Psest_2439: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Pseudomonas stutzeri | 25% id, 73% cov |
bch / Q81DR3: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Bacillus cereus | 27% id, 55% cov |
| AMB_RS04340 amb0852 WP_011383294.1: enoyl-CoA hydratase is similar to: | PaperBLAST |
HIBC1_ARATH / Q9LKJ1: 3-hydroxyisobutyryl-CoA hydrolase 1; CoA-thioester hydrolase CHY1; EC 3.1.2.-; EC 3.1.2.4 from Arabidopsis thaliana | 24% id, 69% cov |
bch / Q81DR3: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Bacillus cereus | 31% id, 41% cov |
| oah AMB_RS10830 amb2143 WP_011384542.1: 6-oxocyclohex-1-ene-1-carbonyl-CoA hydratase is similar to: | PaperBLAST |
Psest_2439: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Pseudomonas stutzeri | 23% id, 71% cov |
PGA1_c17350: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Phaeobacter inhibens | 30% id, 41% cov |
Pf1N1B4_4790: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Pseudomonas fluorescens | 27% id, 40% cov |
| AMB_RS06685 amb1315 WP_011383725.1: enoyl-CoA hydratase-related protein is similar to: | PaperBLAST |
RR42_RS28545: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Cupriavidus basilensis | 31% id, 49% cov |
AO353_25665: 3-hydroxy-isobutyryl-CoA hydrolase (EC 3.1.2.4) from Pseudomonas fluorescens | 36% id, 36% cov |
PfGW456L13_2986: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Pseudomonas fluorescens | 33% id, 38% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 14 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 3934009-3935067 (frame -1) on NC_007626.1 Paramagnetospirillum magneticum AMB-1, complete sequence is similar to: | PaperBLAST |
HIBCH_RAT / Q5XIE6: 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial; 3-hydroxyisobutyryl-coenzyme A hydrolase; HIB-CoA hydrolase; HIBYL-CoA-H; EC 3.1.2.4 from Rattus norvegicus | 45% id, 94% cov |
Lawrence Berkeley National Laboratory