Curated BLAST for Genomes

 

Curated BLAST

Searching in Paramagnetospirillum magneticum AMB-1 (GCF_000009985.1)

Found 138 curated entries in PaperBLAST's database that match '3.1.3.3'.

These curated entries have 107 distinct sequences.

Running ublast with E ≤ 0.01

Found 16 relevant proteins in Paramagnetospirillum magneticum AMB-1, or try another query

serB AMB_RS17605 amb3479 WP_011385839.1: phosphoserine phosphatase SerB
is similar to:
PaperBLAST

SERB_LACLA / Q9CHW3: Phosphoserine phosphatase; PSP; PSPase; O-phosphoserine phosphohydrolase; EC 3.1.3.3 from Lactococcus lactis

41% id,
99% cov

SERB_METJA / Q58989: Phosphoserine phosphatase; PSP; PSPase; O-phosphoserine phosphohydrolase; EC 3.1.3.3 from Methanocaldococcus jannaschii
Q58989: phosphoserine phosphatase (EC 3.1.3.3) from Methanocaldococcus jannaschii

41% id,
97% cov

SERB_STRT2 / Q5M3B3: Phosphoserine phosphatase; PSP; PSPase; O-phosphoserine phosphohydrolase; EC 3.1.3.3 from Streptococcus thermophilus

41% id,
94% cov

More...

glpX AMB_RS06995 amb1382 WP_011383792.1: class II fructose-bisphosphatase
is similar to:
PaperBLAST

FBSB_SYNE7 / Q31QY2: D-fructose 1,6-bisphosphatase class 2/sedoheptulose 1,7-bisphosphatase; FBPase class 2/SBPase; D-fructose-1,6-bisphosphate 1-phosphohydrolase class 2; Fructose-1,6-bisphosphatase F-I; EC 3.1.3.11; EC 3.1.3.37 from Synechococcus elongatus
Q31QY2: fructose-bisphosphatase (EC 3.1.3.11); sedoheptulose-bisphosphatase (EC 3.1.3.37) from Synechococcus elongatus

39% id,
96% cov

Q8DJE9: fructose-bisphosphatase (EC 3.1.3.11); sedoheptulose-bisphosphatase (EC 3.1.3.37) from Thermosynechococcus vestitus

40% id,
95% cov

slr2094 / P73922: fructose bisphosphatase F-I monomer (EC 3.1.3.11; EC 3.1.3.37) from Synechocystis sp.
P73922: fructose-bisphosphatase (EC 3.1.3.11); sedoheptulose-bisphosphatase (EC 3.1.3.37) from Synechocystis sp.

39% id,
97% cov

More...

glpX AMB_RS18870 amb3729 WP_011386085.1: class II fructose-bisphosphatase
is similar to:
PaperBLAST

FBSB_SYNE7 / Q31QY2: D-fructose 1,6-bisphosphatase class 2/sedoheptulose 1,7-bisphosphatase; FBPase class 2/SBPase; D-fructose-1,6-bisphosphate 1-phosphohydrolase class 2; Fructose-1,6-bisphosphatase F-I; EC 3.1.3.11; EC 3.1.3.37 from Synechococcus elongatus
Q31QY2: fructose-bisphosphatase (EC 3.1.3.11); sedoheptulose-bisphosphatase (EC 3.1.3.37) from Synechococcus elongatus

35% id,
97% cov

slr2094 / P73922: fructose bisphosphatase F-I monomer (EC 3.1.3.11; EC 3.1.3.37) from Synechocystis sp.
P73922: fructose-bisphosphatase (EC 3.1.3.11); sedoheptulose-bisphosphatase (EC 3.1.3.37) from Synechocystis sp.

35% id,
97% cov

B1XLK5: fructose-bisphosphatase (EC 3.1.3.11); sedoheptulose-bisphosphatase (EC 3.1.3.37) from Synechococcus sp.

34% id,
97% cov

AMB_RS07735 amb1531 WP_011383941.1: histidine phosphatase family protein
is similar to:
PaperBLAST

PSPB_HYDTT / D3DFP8: Putative phosphoserine phosphatase 2; PSP 2; PSPase 2; Metal-independent phosphoserine phosphatase 2; iPSP2; O-phosphoserine phosphohydrolase 2; EC 3.1.3.3 from Hydrogenobacter thermophilus
D3DFP8: phosphoserine phosphatase (EC 3.1.3.3) from Hydrogenobacter thermophilus

28% id,
90% cov

SHB17_YEAST / P36136: Sedoheptulose 1,7-bisphosphatase; EC 3.1.3.37 from Saccharomyces cerevisiae

28% id,
68% cov

AMB_RS18255 amb3606 WP_231848888.1: bifunctional UDP-sugar hydrolase/5'-nucleotidase
is similar to:
PaperBLAST

5NTD_MOUSE / Q61503: 5'-nucleotidase; 5'-NT; 5'-deoxynucleotidase; Ecto-5'-nucleotidase; IMP-specific 5'-nucleotidase; Thymidylate 5'-phosphatase; CD73 antigen; EC 3.1.3.35; EC 3.1.3.5; EC 3.1.3.89; EC 3.1.3.91; EC 3.1.3.99 from Mus musculus

27% id,
93% cov

5NTD_BOVIN / Q05927: 5'-nucleotidase; 5'-NT; 5'-deoxynucleotidase; Ecto-5'-nucleotidase; IMP-specific 5'-nucleotidase; Thymidylate 5'-phosphatase; CD73 antigen; EC 3.1.3.35; EC 3.1.3.5; EC 3.1.3.89; EC 3.1.3.91; EC 3.1.3.99 from Bos taurus

26% id,
94% cov

5NTD_RAT / P21588: 5'-nucleotidase; 5'-NT; 5'-deoxynucleotidase; Ecto-5'-nucleotidase; IMP-specific 5'-nucleotidase; Thymidylate 5'-phosphatase; CD73 antigen; EC 3.1.3.35; EC 3.1.3.5; EC 3.1.3.89; EC 3.1.3.91; EC 3.1.3.99 from Rattus norvegicus

25% id,
94% cov

More...

AMB_RS22155 amb4379 WP_011386726.1: histidine phosphatase family protein
is similar to:
PaperBLAST

PSPA_HYDTT / D3DFG8: Phosphoserine phosphatase 1; PSP 1; PSPase 1; Metal-independent phosphoserine phosphatase 1; iPSP1; O-phosphoserine phosphohydrolase 1; EC 3.1.3.3 from Hydrogenobacter thermophilus
D3DFG8: phosphoserine phosphatase (EC 3.1.3.3) from Hydrogenobacter thermophilus

31% id,
76% cov

SERCL_ARATH / F4KI56: Metal-independent phosphoserine phosphatase; iPSP; Phosphoglycerate mutase-like protein 3; EC 3.1.3.3 from Arabidopsis thaliana

35% id,
68% cov

SHB17_YEAST / P36136: Sedoheptulose 1,7-bisphosphatase; EC 3.1.3.37 from Saccharomyces cerevisiae

26% id,
68% cov

AMB_RS13390 amb2661 WP_011385041.1: class 1 fructose-bisphosphatase
is similar to:
PaperBLAST

A8IRK4: sedoheptulose-bisphosphatase (EC 3.1.3.37) from Chlamydomonas reinhardtii

30% id,
72% cov

A8DUA7: sedoheptulose-bisphosphatase (EC 3.1.3.37) from Morus alba

28% id,
76% cov

P46284: sedoheptulose-bisphosphatase (EC 3.1.3.37) from Chlamydomonas reinhardtii

29% id,
72% cov

More...

AMB_RS05675 amb1116 WP_011383529.1: PP2C family protein-serine/threonine phosphatase
is similar to:
PaperBLAST

RSBU_BACSU / P40399: Phosphoserine phosphatase RsbU; Sigma factor SigB regulation protein RsbU; EC 3.1.3.3 from Bacillus subtilis
P40399: phosphoserine phosphatase (EC 3.1.3.3) from Bacillus subtilis

27% id,
78% cov

serA AMB_RS16130 amb3193 WP_011385558.1: phosphoglycerate dehydrogenase
is similar to:
PaperBLAST

Echvi_2777: fused D-3-phosphoglycerate dehydrogenase / phosphoserine phosphatase (EC 1.1.1.95; EC 3.1.3.3) from Echinicola vietnamensis

35% id,
58% cov

AMB_RS17805 amb3520 WP_011385879.1: SpoIIE family protein phosphatase
is similar to:
PaperBLAST

RSBU_BACSU / P40399: Phosphoserine phosphatase RsbU; Sigma factor SigB regulation protein RsbU; EC 3.1.3.3 from Bacillus subtilis
P40399: phosphoserine phosphatase (EC 3.1.3.3) from Bacillus subtilis

26% id,
70% cov

AMB_RS17900 amb3537 WP_011385896.1: SpoIIE family protein phosphatase
is similar to:
PaperBLAST

O07014: phosphoserine phosphatase (EC 3.1.3.3) from Bacillus subtilis

23% id,
63% cov

AMB_RS00985 amb0195 WP_043743064.1: D-glycerate dehydrogenase
is similar to:
PaperBLAST

Echvi_2777: fused D-3-phosphoglycerate dehydrogenase / phosphoserine phosphatase (EC 1.1.1.95; EC 3.1.3.3) from Echinicola vietnamensis

30% id,
47% cov

AMB_RS00685 amb0136 WP_011382583.1: phosphoglycerate dehydrogenase
is similar to:
PaperBLAST

Echvi_2777: fused D-3-phosphoglycerate dehydrogenase / phosphoserine phosphatase (EC 1.1.1.95; EC 3.1.3.3) from Echinicola vietnamensis

35% id,
39% cov

AMB_RS19670 amb3888 WP_011386242.1: cation-transporting P-type ATPase
is similar to:
PaperBLAST

SERB_ALBFT / Q21YU0: Phosphoserine phosphatase; PSP; PSPase; O-phosphoserine phosphohydrolase; EC 3.1.3.3 from Albidiferax ferrireducens

26% id,
51% cov

kdpB AMB_RS09645 amb1910 WP_011384315.1: potassium-transporting ATPase subunit KdpB
is similar to:
PaperBLAST

SERB_YEAST / P42941: Phosphoserine phosphatase; PSP; PSPase; O-phosphoserine phosphohydrolase; EC 3.1.3.3 from Saccharomyces cerevisiae

27% id,
33% cov

AMB_RS14560 amb2893 WP_011385270.1: hypothetical protein
is similar to:
PaperBLAST

SYNJ1_RAT / Q62910: Synaptojanin-1; Synaptic inositol 1,4,5-trisphosphate 5-phosphatase 1; EC 3.1.3.36 from Rattus norvegicus

33% id,
9% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 18 reading frames. Except for 6 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

3957404-3959260 (frame +2) on NC_007626.1 Paramagnetospirillum magneticum AMB-1, complete sequence
is similar to:
PaperBLAST

5NTD_MOUSE / Q61503: 5'-nucleotidase; 5'-NT; 5'-deoxynucleotidase; Ecto-5'-nucleotidase; IMP-specific 5'-nucleotidase; Thymidylate 5'-phosphatase; CD73 antigen; EC 3.1.3.35; EC 3.1.3.5; EC 3.1.3.89; EC 3.1.3.91; EC 3.1.3.99 from Mus musculus
Also see hits to annotated proteins above

26% id,
95% cov

5NTD_RAT / P21588: 5'-nucleotidase; 5'-NT; 5'-deoxynucleotidase; Ecto-5'-nucleotidase; IMP-specific 5'-nucleotidase; Thymidylate 5'-phosphatase; CD73 antigen; EC 3.1.3.35; EC 3.1.3.5; EC 3.1.3.89; EC 3.1.3.91; EC 3.1.3.99 from Rattus norvegicus
Also see hits to annotated proteins above

25% id,
95% cov

5NTD_BOVIN / Q05927: 5'-nucleotidase; 5'-NT; 5'-deoxynucleotidase; Ecto-5'-nucleotidase; IMP-specific 5'-nucleotidase; Thymidylate 5'-phosphatase; CD73 antigen; EC 3.1.3.35; EC 3.1.3.5; EC 3.1.3.89; EC 3.1.3.91; EC 3.1.3.99 from Bos taurus
Also see hits to annotated proteins above

25% id,
95% cov

More...

3090691-3092058 (frame +1) on NC_007626.1 Paramagnetospirillum magneticum AMB-1, complete sequence
is similar to:
PaperBLAST

SYNJ1_RAT / Q62910: Synaptojanin-1; Synaptic inositol 1,4,5-trisphosphate 5-phosphatase 1; EC 3.1.3.36 from Rattus norvegicus
Also see hits to annotated proteins above

27% id,
17% cov

2080461-2080727 (frame +3) on NC_007626.1 Paramagnetospirillum magneticum AMB-1, complete sequence
is similar to:
PaperBLAST

SYNJ1_MOUSE / Q8CHC4: Synaptojanin-1; Synaptic inositol 1,4,5-trisphosphate 5-phosphatase 1; EC 3.1.3.36 from Mus musculus

41% id,
6% cov

683948-684382 (frame +2) on NC_007626.1 Paramagnetospirillum magneticum AMB-1, complete sequence
is similar to:
PaperBLAST

SYNJ1_HUMAN / O43426: Synaptojanin-1; Synaptic inositol 1,4,5-trisphosphate 5-phosphatase 1; EC 3.1.3.36 from Homo sapiens
SYNJ1 / O43426: synaptojanin 1 (EC 3.1.3.56; EC 3.1.3.86; EC 3.1.3.36) from Homo sapiens

30% id,
7% cov

3845727-3845924 (frame +3) on NC_007626.1 Paramagnetospirillum magneticum AMB-1, complete sequence
is similar to:
PaperBLAST

SYNJ1_HUMAN / O43426: Synaptojanin-1; Synaptic inositol 1,4,5-trisphosphate 5-phosphatase 1; EC 3.1.3.36 from Homo sapiens
SYNJ1 / O43426: synaptojanin 1 (EC 3.1.3.56; EC 3.1.3.86; EC 3.1.3.36) from Homo sapiens

46% id,
4% cov

47518-47685 (frame +1) on NC_007626.1 Paramagnetospirillum magneticum AMB-1, complete sequence
is similar to:
PaperBLAST

SYNJ1_HUMAN / O43426: Synaptojanin-1; Synaptic inositol 1,4,5-trisphosphate 5-phosphatase 1; EC 3.1.3.36 from Homo sapiens
SYNJ1 / O43426: synaptojanin 1 (EC 3.1.3.56; EC 3.1.3.86; EC 3.1.3.36) from Homo sapiens

40% id,
4% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory