Curated BLAST for Genomes

 

Curated BLAST

Searching in Paramagnetospirillum magneticum AMB-1 (GCF_000009985.1)

Found 529 curated entries in PaperBLAST's database that match '3.2.1.21' as complete word(s).

These curated entries have 444 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Paramagnetospirillum magneticum AMB-1, or try another query

AMB_RS01115 amb0219 WP_011382666.1: GH1 family beta-glucosidase
is similar to:
PaperBLAST

BAE49023.1: amb0219 (EC 3.2.1.21)

100% id,
100% cov

AEM45802.1: cellobiase (Cba3) (EC 3.2.1.21)
G1C1T5: beta-glucosidase (EC 3.2.1.21) from Cellulomonas biazotea

50% id,
99% cov

ADD27066.1: Mrub_0288 (EC 3.2.1.21)

50% id,
98% cov

More...

AMB_RS11280 amb2230 WP_050750700.1: GH1 family beta-glucosidase
is similar to:
PaperBLAST

ACF00459.1: Rpal_1936 (EC 3.2.1.21)

54% id,
96% cov

AEM45802.1: cellobiase (Cba3) (EC 3.2.1.21)
G1C1T5: beta-glucosidase (EC 3.2.1.21) from Cellulomonas biazotea

48% id,
98% cov

ACO44852.1: Deide_00550 (EC 3.2.1.21)

46% id,
98% cov

More...

AMB_RS21595 amb4271 WP_011386619.1: hypothetical protein
is similar to:
PaperBLAST

psu1 / RF|NP_593500.1: cell wall protein Psu1, beta-glucosidase (predicted); EC 3.2.1.21 from Schizosaccharomyces pombe

27% id,
61% cov

AMB_RS01965 amb0387 WP_011382831.1: hypothetical protein
is similar to:
PaperBLAST

psu1 / RF|NP_593500.1: cell wall protein Psu1, beta-glucosidase (predicted); EC 3.2.1.21 from Schizosaccharomyces pombe

32% id,
32% cov

AMB_RS06010 amb1184 WP_011383596.1: hypothetical protein
is similar to:
PaperBLAST

psu1 / RF|NP_593500.1: cell wall protein Psu1, beta-glucosidase (predicted); EC 3.2.1.21 from Schizosaccharomyces pombe

30% id,
29% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory