Curated BLAST for Genomes

 

Curated BLAST

Searching in Paramagnetospirillum magneticum AMB-1 (GCF_000009985.1)

Found 331 curated entries in PaperBLAST's database that match '3.2.1.23' as complete word(s).

These curated entries have 255 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Paramagnetospirillum magneticum AMB-1, or try another query

AMB_RS01115 amb0219 WP_011382666.1: GH1 family beta-glucosidase
is similar to:
PaperBLAST

A0A1E1FFN6: beta-glucosidase (EC 3.2.1.21); beta-galactosidase (EC 3.2.1.23); beta-D-fucosidase (EC 3.2.1.38) from uncultured microorganism

47% id,
98% cov

GH1A_CALOW / E4Q361: Multifunctional glycoside hydrolase; Multifunctional GH; CoGH1A; EC 3.2.1.21; EC 3.2.1.23; EC 3.2.1.37; EC 3.2.1.74; EC 3.2.1.91 from Caldicellulosiruptor owensensis

44% id,
99% cov

ABI35984.1: β-glycosidase (β-gly) (EC 3.2.1.21|3.2.1.23)

44% id,
98% cov

More...

AMB_RS11280 amb2230 WP_050750700.1: GH1 family beta-glucosidase
is similar to:
PaperBLAST

ABI35984.1: β-glycosidase (β-gly) (EC 3.2.1.21|3.2.1.23)

45% id,
99% cov

A0A1E1FFN6: beta-glucosidase (EC 3.2.1.21); beta-galactosidase (EC 3.2.1.23); beta-D-fucosidase (EC 3.2.1.38) from uncultured microorganism

42% id,
96% cov

AEQ38581.1: β-galactosidase (Mbgl) (EC 3.2.1.23)

40% id,
97% cov

More...

AMB_RS15380 amb3055 WP_011385431.1: serine protease
is similar to:
PaperBLAST

ABW87309.1: β-galactosidase (β-gal;BgaA) (EC 3.2.1.23)

32% id,
16% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory