Curated BLAST for Genomes

 

Curated BLAST

Searching in Paramagnetospirillum magneticum AMB-1 (GCF_000009985.1)

Found 69 curated entries in PaperBLAST's database that match '3.2.1.86' as complete word(s).

These curated entries have 47 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Paramagnetospirillum magneticum AMB-1, or try another query

AMB_RS11280 amb2230 WP_050750700.1: GH1 family beta-glucosidase
is similar to:
PaperBLAST

BAD77499.1: 6-phospho-β-glycosidase (GK3214) (EC 3.2.1.85|3.2.1.86)

37% id,
98% cov

AHL67640.1: 6-P-β-galactosidase (Gan1D) (EC 3.2.1.86)
W8QF82: 6-phospho-beta-galactosidase (EC 3.2.1.85); 6-phospho-beta-glucosidase (EC 3.2.1.86) from Geobacillus stearothermophilus

37% id,
98% cov

AAB49339.1: 6-P-β-glucosidase (PbgA) (EC 3.2.1.86)

35% id,
98% cov

More...

AMB_RS01115 amb0219 WP_011382666.1: GH1 family beta-glucosidase
is similar to:
PaperBLAST

BAD76141.1: 6-phospho-β-glycosidase (GK1856) (EC 3.2.1.85|3.2.1.86)

37% id,
96% cov

AAK78365.1: CAC0385 (EC 3.2.1.86)

35% id,
99% cov

GMUD_BACSU / O05508: 6-phospho-beta-glucosidase GmuD; Aryl-phospho-beta-D-glucosidase BglD; Glucomannan utilization protein D; EC 3.2.1.86 from Bacillus subtilis
BAA19708.1: 6-P-β-glucosidase (YdhP;BSU05840) (EC 3.2.1.86)

36% id,
97% cov

More...

AMB_RS13755 amb2735 WP_011385114.1: alpha-glucosidase/alpha-galactosidase
is similar to:
PaperBLAST

BAB35863.1: 6-P-β-glucosidase (ChbF;ECs2440) (EC 3.2.1.86)

27% id,
95% cov

CHBF_ECOLI / P17411: 6-phospho-beta-glucosidase; Cellobiose-6-phosphate hydrolase; Phospho-chitobiase; EC 3.2.1.86 from Escherichia coli
YdjD / b1734: monoacetylchitobiose-6-phosphate hydrolase (EC 3.2.1.86) from Escherichia coli
AAC74804.1: 6-P-β-glucosidase (CelF) (EC 3.2.1.86)
chbF: 6-phospho-beta-glucosidase; EC 3.2.1.86 from Escherichia coli
chbF / P17411: monoacetylchitobiose-6-phosphate hydrolase (EC 3.2.1.86) from Escherichia coli

27% id,
95% cov

Q9AI65: alpha-glucosidase (EC 3.2.1.20); 6-phospho-beta-glucosidase (EC 3.2.1.86) from Erwinia rhapontici

40% id,
52% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory