Curated BLAST for Genomes

 

Curated BLAST

Searching in Magnetospirillum magneticum AMB-1 (GCF_000009985.1)

Found 36 curated entries in PaperBLAST's database that match '3.5.1.25' as complete word(s).

These curated entries have 27 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Magnetospirillum magneticum AMB-1, or try another query

AMB_RS07505 amb1486 WP_011383896.1: adenine deaminase
is similar to:
PaperBLAST

Q8DN83: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Streptococcus pneumoniae

23% id,
92% cov

nagA / A3CQ16: N-acetylglucosamine-6-phosphate deacetylase subunit (EC 3.5.1.25) from Streptococcus sanguinis

22% id,
91% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory