Curated BLAST for Genomes

 

Curated BLAST

Searching in Magnetospirillum magneticum AMB-1 (GCF_000009985.1)

Found 49 curated entries in PaperBLAST's database that match '3.7.1.2'.

These curated entries have 37 distinct sequences.

Running ublast with E ≤ 0.01

Found 12 relevant proteins in Magnetospirillum magneticum AMB-1, or try another query

AMB_RS10830 amb2143 WP_011384542.1: 6-oxocyclohex-1-ene-1-carbonyl-CoA hydratase
is similar to:
PaperBLAST

BAMA_THAAR / O87872: 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase; 6-oxocyclohex-1-ene-1-carbonyl-CoA hydratase; Beta-oxoacyl-CoA hydrolase; Oah; EC 3.7.1.21 from Thauera aromatica
O87872: 6-oxocyclohex-1-ene-1-carbonyl-CoA hydratase (EC 3.7.1.21) from Thauera aromatica

80% id,
100% cov

BAMA_GEOMG / Q39TV7: 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase; 6-OCH-CoA hydrolase; 6-oxocyclohex-1-ene-1-carbonyl-CoA hydratase; EC 3.7.1.21 from Geobacter metallireducens

76% id,
99% cov

BAMA_SYNAS / Q2LXU2: 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase; 6-OCH-CoA hydrolase; 6-oxocyclohex-1-ene-1-carbonyl-CoA hydratase; EC 3.7.1.21 from Syntrophus aciditrophicus
bamA / Q2LXU2: 6-oxocyclohex-1-ene-1-carbonyl-CoA hydratase monomer (EC 3.7.1.21) from Syntrophus aciditrophicus

52% id,
93% cov

AMB_RS14475 amb2875 WP_011385252.1: FAA hydrolase family protein
is similar to:
PaperBLAST

naaD / F8QQ75: 3-fumarylpyruvate hydrolase (EC 3.7.1.20) from Bradyrhizobium sp.

53% id,
93% cov

NAGK_RALSP / O86042: Fumarylpyruvate hydrolase; Naphthalene degradation protein K; EC 3.7.1.20 from Ralstonia sp.
nagK / O86042: fumarylpyruvate hydrolase (EC 3.7.1.20) from Ralstonia sp.

51% id,
96% cov

HBZF_PSEAC / Q0QFQ3: Maleylpyruvate hydrolase; MPH11; EC 3.7.1.23 from Pseudomonas alcaligenes
hbzF / Q0QFQ3: maleylpyruvate hydrolase monomer (EC 3.7.1.23) from Pseudomonas alcaligenes
Q0QFQ3: maleylpyruvate hydrolase (EC 3.7.1.23) from Pseudomonas alcaligenes

28% id,
81% cov

AMB_RS14215 amb2827 WP_011385204.1: FAA hydrolase family protein
is similar to:
PaperBLAST

HSERO_RS06355: 2,4-diketo-3-deoxy-L-fuconate hydrolase (EC 3.7.1.26) from Herbaspirillum seropedicae

35% id,
97% cov

lra6 / Q1NEI7: L-2,4-diketo-3-deoxyrhamnonate hydrolase (EC 3.7.1.26) from Sphingomonas sp.

32% id,
92% cov

naaD / F8QQ75: 3-fumarylpyruvate hydrolase (EC 3.7.1.20) from Bradyrhizobium sp.

33% id,
87% cov

More...

AMB_RS04120 amb0806 WP_011383249.1: 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase
is similar to:
PaperBLAST

HSERO_RS06355: 2,4-diketo-3-deoxy-L-fuconate hydrolase (EC 3.7.1.26) from Herbaspirillum seropedicae

35% id,
93% cov

HBZF_PSEAC / Q0QFQ3: Maleylpyruvate hydrolase; MPH11; EC 3.7.1.23 from Pseudomonas alcaligenes
hbzF / Q0QFQ3: maleylpyruvate hydrolase monomer (EC 3.7.1.23) from Pseudomonas alcaligenes
Q0QFQ3: maleylpyruvate hydrolase (EC 3.7.1.23) from Pseudomonas alcaligenes

38% id,
82% cov

lra6 / Q1NEI7: L-2,4-diketo-3-deoxyrhamnonate hydrolase (EC 3.7.1.26) from Sphingomonas sp.

34% id,
85% cov

More...

AMB_RS13560 amb2696 WP_011385076.1: ribulose-bisphosphate carboxylase
is similar to:
PaperBLAST

oiaT / A7IJG7: 3-oxoisoapionate-4-phosphate transcarboxylase/hydrolase (EC 3.7.1.28) from Xanthobacter autotrophicus

29% id,
99% cov

AMB_RS12840 amb2550 WP_011384931.1: thiamine pyrophosphate protein
is similar to:
PaperBLAST

HSERO_RS12130: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase IolD (EC 3.7.1.22) from Herbaspirillum seropedicae

28% id,
86% cov

SMc01166: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase IolD (EC 3.7.1.22) from Sinorhizobium meliloti

27% id,
86% cov

PGA1_c07250: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase IolD (EC 3.7.1.22) from Phaeobacter inhibens

26% id,
88% cov

More...

AMB_RS17740 amb3507 WP_011385867.1: acetolactate synthase 3 large subunit
is similar to:
PaperBLAST

SMc01166: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase IolD (EC 3.7.1.22) from Sinorhizobium meliloti

26% id,
93% cov

Q9L3I0: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (ring-opening) (EC 3.7.1.22) from Rhizobium leguminosarum

26% id,
87% cov

HSERO_RS12130: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase IolD (EC 3.7.1.22) from Herbaspirillum seropedicae

25% id,
92% cov

More...

AMB_RS04050 amb0792 WP_011383235.1: thiamine pyrophosphate-binding protein
is similar to:
PaperBLAST

Q9L3I0: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (ring-opening) (EC 3.7.1.22) from Rhizobium leguminosarum

26% id,
89% cov

AO353_21360: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase IolD (EC 3.7.1.22) from Pseudomonas fluorescens

24% id,
93% cov

PS417_11870: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase IolD (EC 3.7.1.22) from Pseudomonas simiae

25% id,
88% cov

More...

AMB_RS18135 amb3583 WP_043745113.1: enoyl-CoA hydratase/isomerase family protein
is similar to:
PaperBLAST

BAMA_THAAR / O87872: 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase; 6-oxocyclohex-1-ene-1-carbonyl-CoA hydratase; Beta-oxoacyl-CoA hydrolase; Oah; EC 3.7.1.21 from Thauera aromatica
O87872: 6-oxocyclohex-1-ene-1-carbonyl-CoA hydratase (EC 3.7.1.21) from Thauera aromatica

25% id,
77% cov

BAMA_GEOMG / Q39TV7: 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase; 6-OCH-CoA hydrolase; 6-oxocyclohex-1-ene-1-carbonyl-CoA hydratase; EC 3.7.1.21 from Geobacter metallireducens

28% id,
37% cov

BAMA_SYNAS / Q2LXU2: 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase; 6-OCH-CoA hydrolase; 6-oxocyclohex-1-ene-1-carbonyl-CoA hydratase; EC 3.7.1.21 from Syntrophus aciditrophicus
bamA / Q2LXU2: 6-oxocyclohex-1-ene-1-carbonyl-CoA hydratase monomer (EC 3.7.1.21) from Syntrophus aciditrophicus

25% id,
36% cov

AMB_RS03265 amb0634 WP_011383077.1: enoyl-CoA hydratase
is similar to:
PaperBLAST

BAMA_GEOMG / Q39TV7: 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase; 6-OCH-CoA hydrolase; 6-oxocyclohex-1-ene-1-carbonyl-CoA hydratase; EC 3.7.1.21 from Geobacter metallireducens

31% id,
49% cov

AMB_RS15050 amb2990 WP_011385366.1: multifunctional fatty acid oxidation complex subunit alpha
is similar to:
PaperBLAST

BAMA_GEOMG / Q39TV7: 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase; 6-OCH-CoA hydrolase; 6-oxocyclohex-1-ene-1-carbonyl-CoA hydratase; EC 3.7.1.21 from Geobacter metallireducens

26% id,
50% cov

AMB_RS13040 amb2591 WP_011384972.1: enoyl-CoA hydratase/isomerase family protein
is similar to:
PaperBLAST

BAMA_GEOMG / Q39TV7: 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase; 6-OCH-CoA hydrolase; 6-oxocyclohex-1-ene-1-carbonyl-CoA hydratase; EC 3.7.1.21 from Geobacter metallireducens

24% id,
47% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 11 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory