Curated BLAST for Genomes

 

Curated BLAST

Searching in Magnetospirillum magneticum AMB-1 (GCF_000009985.1)

Found 15 curated entries in PaperBLAST's database that match '3.7.1.2' as complete word(s).

These curated entries have 11 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Magnetospirillum magneticum AMB-1, or try another query

AMB_RS14215 amb2827 WP_011385204.1: FAA hydrolase family protein
is similar to:
PaperBLAST

A0A076VF18: fumarylacetoacetase (EC 3.7.1.2) from Rhodotorula diobovata

35% id,
76% cov

AMB_RS04120 amb0806 WP_011383249.1: 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase
is similar to:
PaperBLAST

A0A076VF18: fumarylacetoacetase (EC 3.7.1.2) from Rhodotorula diobovata

35% id,
73% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory