Curated BLAST for Genomes

 

Curated BLAST

Searching in Paramagnetospirillum magneticum AMB-1 (GCF_000009985.1)

Found 20 curated entries in PaperBLAST's database that match '3.7.1.2' as complete word(s).

These curated entries have 15 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Paramagnetospirillum magneticum AMB-1, or try another query

AMB_RS14475 amb2875 WP_043744625.1: fumarylacetoacetate hydrolase family protein
is similar to:
PaperBLAST

A0A0M3SVN7: fumarylacetoacetase (EC 3.7.1.2) from Cupriavidus gilardii

54% id,
100% cov

A0A1B0ZSC0: fumarylacetoacetase (EC 3.7.1.2) from Phaeobacter gallaeciensis

53% id,
99% cov

A0A0D5YDA5: fumarylacetoacetase (EC 3.7.1.2) from Acinetobacter baumannii

33% id,
92% cov

More...

AMB_RS14215 amb2827 WP_011385204.1: fumarylacetoacetate hydrolase family protein
is similar to:
PaperBLAST

K0A9N9: fumarylacetoacetase (EC 3.7.1.2) from Exiguobacterium antarcticum

47% id,
80% cov

A0A1B0ZSC0: fumarylacetoacetase (EC 3.7.1.2) from Phaeobacter gallaeciensis

33% id,
86% cov

A0A0D5YDA5: fumarylacetoacetase (EC 3.7.1.2) from Acinetobacter baumannii

31% id,
86% cov

More...

AMB_RS04120 amb0806 WP_011383249.1: fumarylacetoacetate hydrolase family protein
is similar to:
PaperBLAST

A0A0D5YDA5: fumarylacetoacetase (EC 3.7.1.2) from Acinetobacter baumannii

29% id,
92% cov

A0A1B0ZSC0: fumarylacetoacetase (EC 3.7.1.2) from Phaeobacter gallaeciensis

30% id,
86% cov

A0A076VF18: fumarylacetoacetase (EC 3.7.1.2) from Rhodotorula diobovata

35% id,
73% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory