Searching in Paramagnetospirillum magneticum AMB-1 (GCF_000009985.1)
Found 56 curated entries in PaperBLAST's database that match '4.1.1.19' as complete word(s).
These curated entries have 40 distinct sequences.
Running ublast with E ≤ 0.01
Found 4 relevant proteins in Paramagnetospirillum magneticum AMB-1, or try another query
| AMB_RS05630 amb1108 WP_011383521.1: Orn/Lys/Arg decarboxylase N-terminal domain-containing protein is similar to: | PaperBLAST |
E8X9U7: arginine decarboxylase (EC 4.1.1.19) from Salmonella enterica | 33% id, 96% cov |
ADIA_ECOLI / P28629: Biodegradative arginine decarboxylase; ADC; EC 4.1.1.19 from Escherichia coli | 32% id, 96% cov |
| AMB_RS07020 amb1388 WP_011383798.1: type III PLP-dependent enzyme is similar to: | PaperBLAST |
ADC / Q96A70: arginine decarboxylase (EC 4.1.1.19) from Homo sapiens | 28% id, 78% cov |
A0A076IP90: arginine decarboxylase (EC 4.1.1.19) from Phocaeicola dorei | 26% id, 41% cov |
SPE1_ORYSJ / Q9SNN0: Arginine decarboxylase 1; ARGDC1; OsADC1; EC 4.1.1.19 from Oryza sativa | 26% id, 39% cov |
| AMB_RS05600 amb1101 WP_011383514.1: type III PLP-dependent enzyme is similar to: | PaperBLAST |
ADC / Q96A70: arginine decarboxylase (EC 4.1.1.19) from Homo sapiens | 28% id, 73% cov |
| lysA AMB_RS22725 amb4491 WP_011386835.1: diaminopimelate decarboxylase is similar to: | PaperBLAST |
P72587: arginine decarboxylase (EC 4.1.1.19) from Synechocystis sp. | 23% id, 54% cov |
speA / Q9HUX1: arginine decarboxylase, biosynthetic (EC 4.1.1.19) from Pseudomonas aeruginosa | 26% id, 43% cov |
Q8YRP3: arginine decarboxylase (EC 4.1.1.19) from Nostoc sp. | 24% id, 47% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 1505630-1506826 (frame +2) on NC_007626.1 Paramagnetospirillum magneticum AMB-1, complete sequence is similar to: | PaperBLAST |
ADC / Q96A70: arginine decarboxylase (EC 4.1.1.19) from Homo sapiens | 28% id, 79% cov |
Lawrence Berkeley National Laboratory