Curated BLAST for Genomes

 

Curated BLAST

Searching in Paramagnetospirillum magneticum AMB-1 (GCF_000009985.1)

Found 8 curated entries in PaperBLAST's database that match '4.1.1.77' as complete word(s).

These curated entries have 7 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Paramagnetospirillum magneticum AMB-1, or try another query

hpaH AMB_RS04100 amb0802 WP_011383245.1: 2-oxo-hepta-3-ene-1,7-dioic acid hydratase
is similar to:
PaperBLAST

B0VXM8: 2-oxo-3-hexenedioate decarboxylase (EC 4.1.1.77) from Geobacillus stearothermophilus

38% id,
98% cov

Q1XGK3: 2-oxo-3-hexenedioate decarboxylase (EC 4.1.1.77) from Pseudomonas putida

36% id,
99% cov

praD / C4TP06: 2-oxo-3-hexenedioate decarboxylase (EC 4.1.1.77) from Paenibacillus sp.

36% id,
96% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory