Searching in Paramagnetospirillum magneticum AMB-1 (GCF_000009985.1)
Found 3 curated entries in PaperBLAST's database that match '4.2.1.117'.
These curated entries have 1 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Paramagnetospirillum magneticum AMB-1, or try another query
AMB_RS18485 amb3651 WP_011386009.1: aconitate hydratase AcnA is similar to: | PaperBLAST |
ACND_SHEON / Q8EJW3: 2-methylcitrate dehydratase (2-methyl-trans-aconitate forming); Aconitate hydratase; ACN; Aconitase; EC 4.2.1.117; EC 4.2.1.3 from Shewanella oneidensis | 48% id, 54% cov |
ACND_SHEON / Q8EJW3: 2-methylcitrate dehydratase (2-methyl-trans-aconitate forming); Aconitate hydratase; ACN; Aconitase; EC 4.2.1.117; EC 4.2.1.3 from Shewanella oneidensis | 40% id, 41% cov |
AMB_RS20560 amb4067 WP_011386418.1: 3-isopropylmalate dehydratase large subunit is similar to: | PaperBLAST |
ACND_SHEON / Q8EJW3: 2-methylcitrate dehydratase (2-methyl-trans-aconitate forming); Aconitate hydratase; ACN; Aconitase; EC 4.2.1.117; EC 4.2.1.3 from Shewanella oneidensis | 26% id, 46% cov |
AMB_RS20565 amb4068 WP_011386419.1: 3-isopropylmalate dehydratase small subunit is similar to: | PaperBLAST |
ACND_SHEON / Q8EJW3: 2-methylcitrate dehydratase (2-methyl-trans-aconitate forming); Aconitate hydratase; ACN; Aconitase; EC 4.2.1.117; EC 4.2.1.3 from Shewanella oneidensis | 35% id, 6% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory