Curated BLAST for Genomes

 

Curated BLAST

Searching in Magnetospirillum magneticum AMB-1 (GCF_000009985.1)

Found 13 curated entries in PaperBLAST's database that match '4.2.1.18'.

These curated entries have 11 distinct sequences.

Running ublast with E ≤ 0.01

Found 17 relevant proteins in Magnetospirillum magneticum AMB-1, or try another query

AMB_RS03470 amb0675 WP_011383118.1: enoyl-CoA hydratase
is similar to:
PaperBLAST

liuC / Q88FM3: 3-methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Pseudomonas putida

47% id,
91% cov

Pf6N2E2_2193: Methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Pseudomonas fluorescens

46% id,
91% cov

AO356_01590: Methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Pseudomonas fluorescens

46% id,
90% cov

More...

AMB_RS03645 amb0710 WP_043743342.1: enoyl-CoA hydratase
is similar to:
PaperBLAST

SM_b21126: 3-methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Sinorhizobium meliloti

39% id,
94% cov

liuC / Q88FM3: 3-methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Pseudomonas putida

36% id,
91% cov

Pf6N2E2_2193: Methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Pseudomonas fluorescens

34% id,
95% cov

More...

AMB_RS13040 amb2591 WP_011384972.1: enoyl-CoA hydratase/isomerase family protein
is similar to:
PaperBLAST

Q1D5Y4: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Myxococcus xanthus

39% id,
94% cov

Fer4 / Q4PEN0: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Ustilago maydis

36% id,
93% cov

Pf6N2E2_2193: Methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Pseudomonas fluorescens

33% id,
91% cov

More...

AMB_RS00905 amb0178 WP_011382625.1: 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase
is similar to:
PaperBLAST

Q1D5Y4: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Myxococcus xanthus

36% id,
100% cov

Fer4 / Q4PEN0: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Ustilago maydis

32% id,
94% cov

CA265_RS09125: Methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Pedobacter sp.

26% id,
98% cov

More...

AMB_RS03265 amb0634 WP_011383077.1: enoyl-CoA hydratase
is similar to:
PaperBLAST

Q1D5Y4: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Myxococcus xanthus

36% id,
98% cov

Fer4 / Q4PEN0: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Ustilago maydis

33% id,
92% cov

F4JML5: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Arabidopsis thaliana

37% id,
81% cov

More...

AMB_RS13070 amb2597 WP_011384978.1: enoyl-CoA hydratase
is similar to:
PaperBLAST

Q1D5Y4: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Myxococcus xanthus

36% id,
96% cov

Fer4 / Q4PEN0: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Ustilago maydis

34% id,
93% cov

F4JML5: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Arabidopsis thaliana

36% id,
83% cov

More...

AMB_RS04340 amb0852 WP_011383294.1: enoyl-CoA hydratase
is similar to:
PaperBLAST

SM_b21126: 3-methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Sinorhizobium meliloti

34% id,
99% cov

CA265_RS09125: Methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Pedobacter sp.

31% id,
100% cov

Q1D5Y4: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Myxococcus xanthus

33% id,
94% cov

More...

AMB_RS13030 amb2589 WP_011384970.1: enoyl-CoA hydratase
is similar to:
PaperBLAST

Q1D5Y4: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Myxococcus xanthus

31% id,
99% cov

CA265_RS09125: Methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Pedobacter sp.

27% id,
96% cov

Fer4 / Q4PEN0: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Ustilago maydis

27% id,
93% cov

More...

AMB_RS06685 amb1315 WP_011383725.1: enoyl-CoA hydratase
is similar to:
PaperBLAST

CA265_RS09125: Methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Pedobacter sp.

31% id,
97% cov

Q1D5Y4: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Myxococcus xanthus

31% id,
96% cov

F4JML5: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Arabidopsis thaliana

35% id,
83% cov

More...

AMB_RS11335 amb2242 WP_043744278.1: methylmalonyl-CoA decarboxylase
is similar to:
PaperBLAST

Q1D5Y4: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Myxococcus xanthus

30% id,
100% cov

F4JML5: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Arabidopsis thaliana

30% id,
83% cov

AUHM_MOUSE / Q9JLZ3: Methylglutaconyl-CoA hydratase, mitochondrial; 3-MG-CoA hydratase; AU-specific RNA-binding enoyl-CoA hydratase; AU-binding enoyl-CoA hydratase; muAUH; Itaconyl-CoA hydratase; EC 4.2.1.18; EC 4.2.1.56 from Mus musculus

30% id,
84% cov

More...

AMB_RS20905 amb4133 WP_011386482.1: enoyl-CoA hydratase/carnithine racemase
is similar to:
PaperBLAST

CA265_RS09125: Methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Pedobacter sp.

30% id,
99% cov

Q1D5Y4: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Myxococcus xanthus

28% id,
97% cov

Fer4 / Q4PEN0: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Ustilago maydis

27% id,
93% cov

More...

AMB_RS18135 amb3583 WP_043745113.1: enoyl-CoA hydratase/isomerase family protein
is similar to:
PaperBLAST

Q1D5Y4: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Myxococcus xanthus

29% id,
96% cov

F4JML5: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Arabidopsis thaliana

24% id,
67% cov

AMB_RS15050 amb2990 WP_011385366.1: multifunctional fatty acid oxidation complex subunit alpha
is similar to:
PaperBLAST

Q1D5Y4: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Myxococcus xanthus

38% id,
71% cov

F4JML5: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Arabidopsis thaliana

33% id,
81% cov

SM_b21126: 3-methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Sinorhizobium meliloti

27% id,
91% cov

More...

AMB_RS10830 amb2143 WP_011384542.1: 6-oxocyclohex-1-ene-1-carbonyl-CoA hydratase
is similar to:
PaperBLAST

Q1D5Y4: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Myxococcus xanthus

31% id,
89% cov

AMB_RS10825 amb2142 WP_011384541.1: cyclohexa-1,5-dienecarbonyl-CoA hydratase
is similar to:
PaperBLAST

liuC / Q88FM3: 3-methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Pseudomonas putida

28% id,
95% cov

Pf6N2E2_2193: Methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Pseudomonas fluorescens

27% id,
95% cov

AO356_01590: Methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Pseudomonas fluorescens

27% id,
95% cov

More...

AMB_RS03460 amb0673 WP_011383116.1: hydroxymethylglutaryl-CoA lyase
is similar to:
PaperBLAST

hlyA: 3-hydroxy-3-methylglutaryl-coenzyme A lyase/3-methylglutaconyl-coenzyme A hydratase; EC 4.1.3.4; EC 4.2.1.18 from Emericella nidulans

51% id,
49% cov

AMB_RS12890 amb2561 WP_011384942.1: enoyl-CoA hydratase/isomerase family protein
is similar to:
PaperBLAST

Q1D5Y4: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Myxococcus xanthus

27% id,
66% cov

F4JML5: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Arabidopsis thaliana

26% id,
61% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 18 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory