Curated BLAST for Genomes

 

Curated BLAST

Searching in Magnetospirillum magneticum AMB-1 (GCF_000009985.1)

Found 10 curated entries in PaperBLAST's database that match '4.2.1.80' as complete word(s).

These curated entries have 7 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Magnetospirillum magneticum AMB-1, or try another query

AMB_RS04100 amb0802 WP_011383245.1: 2-oxo-hepta-3-ene-1,7-dioic acid hydratase
is similar to:
PaperBLAST

MHPD_COMTE / Q9S156: 2-keto-4-pentenoate hydratase; 2-hydroxypentadienoic acid hydratase; EC 4.2.1.80 from Comamonas testosteroni

37% id,
98% cov

AMNF_PSESP / Q9KWS4: 2-oxopent-4-enoate hydratase; 2-keto-4-pentenoate hydratase; EC 4.2.1.80 from Pseudomonas sp.

36% id,
98% cov

xylJ / P23107: 2-oxopent-4-enoate hydratase subunit (EC 4.2.1.80) from Pseudomonas putida

35% id,
98% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory