Curated BLAST
Searching in Paramagnetospirillum magneticum AMB-1 (GCF_000009985.1)
Found 17 curated entries in PaperBLAST's database that match '4.2.1.82' as complete word(s).
These curated entries have 8 distinct sequences.
Running ublast with E ≤ 0.01
Found 1 relevant proteins in Paramagnetospirillum magneticum AMB-1, or try another query
ilvD AMB_RS12770 amb2536 WP_011384917.1: dihydroxy-acid dehydratase
is similar to: | PaperBLAST |
YAGF_ECOLI / P77596: D-xylonate dehydratase YagF; EC 4.2.1.82 from Escherichia coli
YagF / b0269: CP4-6 prophage; D-xylonate dehydratase (EC 4.2.1.82) from Escherichia coli
yagF / P77596: CP4-6 prophage; D-xylonate dehydratase (EC 4.2.1.82) from Escherichia coli | 30% id,
87% cov |
xylD / A0A0H3C6H6: xylonate dehydratase monomer (EC 4.2.1.82) from Caulobacter vibrioides
CCNA_00862: Xylonate dehydratase (EC 4.2.1.82) from Caulobacter crescentus | 35% id,
57% cov |
XYLD_CAUVC / Q9A9Z2: D-xylonate dehydratase; XyDHT; Gluconate dehydratase; EC 4.2.1.82; EC 4.2.1.39 from Caulobacter vibrioides
Q9A9Z2: xylonate dehydratase (EC 4.2.1.82) from Caulobacter vibrioides | 35% id,
57% cov |
Pf6N2E2_1668: Xylonate dehydratase (EC 4.2.1.82) from Pseudomonas fluorescens | 32% id,
54% cov |
AO356_28760: Xylonate dehydratase (EC 4.2.1.82) from Pseudomonas fluorescens | 32% id,
54% cov |
YJHG_ECOLI / P39358: D-xylonate dehydratase YjhG; EC 4.2.1.82 from Escherichia coli
YjhG / b4297: KpLE2 phage-like element; D-xylonate dehydratase (EC 4.2.1.82) from Escherichia coli
yjhG / P39358: KpLE2 phage-like element; D-xylonate dehydratase (EC 4.2.1.82) from Escherichia coli
P39358: xylonate dehydratase (EC 4.2.1.82) from Escherichia coli | 30% id,
50% cov |
xylD / A0A0H3C6H6: xylonate dehydratase monomer (EC 4.2.1.82) from Caulobacter vibrioides
CCNA_00862: Xylonate dehydratase (EC 4.2.1.82) from Caulobacter crescentus | 26% id,
33% cov |
XYLD_CAUVC / Q9A9Z2: D-xylonate dehydratase; XyDHT; Gluconate dehydratase; EC 4.2.1.82; EC 4.2.1.39 from Caulobacter vibrioides
Q9A9Z2: xylonate dehydratase (EC 4.2.1.82) from Caulobacter vibrioides | 26% id,
33% cov |
AO356_28760: Xylonate dehydratase (EC 4.2.1.82) from Pseudomonas fluorescens | 28% id,
30% cov |
Pf6N2E2_1668: Xylonate dehydratase (EC 4.2.1.82) from Pseudomonas fluorescens | 27% id,
30% cov |
More... |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 1 reading frames. These were all redundant with annotated proteins.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory