Curated BLAST for Genomes

 

Curated BLAST

Searching in Magnetospirillum magneticum AMB-1 (GCF_000009985.1)

Found 17 curated entries in PaperBLAST's database that match '5.2.1.2'.

These curated entries have 12 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Magnetospirillum magneticum AMB-1, or try another query

AMB_RS19950 amb3942 WP_011386296.1: glutathione S-transferase family protein
is similar to:
PaperBLAST

Pf6N2E2_5292: Maleylacetoacetate isomerase (EC 5.2.1.2) from Pseudomonas fluorescens

30% id,
99% cov

AO356_16835: Maleylacetoacetate isomerase (EC 5.2.1.2) from Pseudomonas fluorescens

32% id,
82% cov

Ac3H11_2306: Maleylacetoacetate isomerase (EC 5.2.1.2) from Acidovorax sp.

32% id,
80% cov

More...

AMB_RS21805 amb4311 WP_011386659.1: glutathione transferase GstA
is similar to:
PaperBLAST

MAAI_HUMAN / O43708: Maleylacetoacetate isomerase; MAAI; GSTZ1-1; Glutathione S-transferase zeta 1; EC 5.2.1.2; EC 2.5.1.18 from Homo sapiens
GSTZ1 / O43708: maleylacetoacetate isomerase/glutathione transferase ζ monomer (EC 2.5.1.18; EC 5.2.1.2) from Homo sapiens
O43708: glutathione transferase (EC 2.5.1.18); maleylacetoacetate isomerase (EC 5.2.1.2) from Homo sapiens

27% id,
90% cov

AMB_RS20760 amb4106 WP_011386456.1: glutathione S-transferase
is similar to:
PaperBLAST

MAAI_RAT / P57113: Maleylacetoacetate isomerase; MAAI; GSTZ1-1; Glutathione S-transferase zeta 1; EC 5.2.1.2; EC 2.5.1.18 from Rattus norvegicus

30% id,
78% cov

MAAI_HUMAN / O43708: Maleylacetoacetate isomerase; MAAI; GSTZ1-1; Glutathione S-transferase zeta 1; EC 5.2.1.2; EC 2.5.1.18 from Homo sapiens
GSTZ1 / O43708: maleylacetoacetate isomerase/glutathione transferase ζ monomer (EC 2.5.1.18; EC 5.2.1.2) from Homo sapiens
O43708: glutathione transferase (EC 2.5.1.18); maleylacetoacetate isomerase (EC 5.2.1.2) from Homo sapiens

36% id,
47% cov

Psest_3511: Maleylacetoacetate isomerase (EC 5.2.1.2) from Pseudomonas stutzeri

34% id,
49% cov

AMB_RS14065 amb2796 WP_011385174.1: HTH domain-containing protein
is similar to:
PaperBLAST

MAAI1_DROME / Q9VHD3: Probable maleylacetoacetate isomerase 1; MAAI 1; Glutathione S-transferase zeta 1; EC 5.2.1.2; EC 2.5.1.18 from Drosophila melanogaster

27% id,
82% cov

MAAI_RAT / P57113: Maleylacetoacetate isomerase; MAAI; GSTZ1-1; Glutathione S-transferase zeta 1; EC 5.2.1.2; EC 2.5.1.18 from Rattus norvegicus

28% id,
67% cov

MAAI_HUMAN / O43708: Maleylacetoacetate isomerase; MAAI; GSTZ1-1; Glutathione S-transferase zeta 1; EC 5.2.1.2; EC 2.5.1.18 from Homo sapiens
GSTZ1 / O43708: maleylacetoacetate isomerase/glutathione transferase ζ monomer (EC 2.5.1.18; EC 5.2.1.2) from Homo sapiens
O43708: glutathione transferase (EC 2.5.1.18); maleylacetoacetate isomerase (EC 5.2.1.2) from Homo sapiens

24% id,
67% cov

AMB_RS04025 amb0787 WP_011383230.1: glutathione S-transferase
is similar to:
PaperBLAST

AO353_15560: Maleylacetoacetate isomerase (EC 5.2.1.2) from Pseudomonas fluorescens

27% id,
74% cov

Pf6N2E2_5292: Maleylacetoacetate isomerase (EC 5.2.1.2) from Pseudomonas fluorescens

26% id,
74% cov

Ac3H11_2306: Maleylacetoacetate isomerase (EC 5.2.1.2) from Acidovorax sp.

32% id,
48% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory