Curated BLAST for Genomes

 

Curated BLAST

Searching in Paramagnetospirillum magneticum AMB-1 (GCF_000009985.1)

Found 3 curated entries in PaperBLAST's database that match '5.4.1.4'.

These curated entries have 1 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Paramagnetospirillum magneticum AMB-1, or try another query

AMB_RS01290 amb0254 WP_011382701.1: amidohydrolase family protein
is similar to:
PaperBLAST

GLI_AGRFC / A9CEQ7: D-galactarolactone isomerase; GLI; Galactaro delta-lactone isomerase; EC 5.4.1.4 from Agrobacterium fabrum
gli / A9CEQ7: D-galactarolactone isomerase (EC 5.4.1.4) from Agrobacterium fabrum
A9CEQ7: D-galactarolactone isomerase (EC 5.4.1.4) from Agrobacterium tumefaciens

28% id,
93% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory