Curated BLAST for Genomes

 

Curated BLAST

Searching in Magnetospirillum magneticum AMB-1 (GCF_000009985.1)

Found 4 curated entries in PaperBLAST's database that match '5.5.1.27'.

These curated entries have 2 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Magnetospirillum magneticum AMB-1, or try another query

AMB_RS01290 amb0254 WP_011382701.1: 2-pyrone-4,6-dicarboxylate hydrolase
is similar to:
PaperBLAST

A9CEQ7: D-galactarolactone cycloisomerase (EC 5.5.1.27) from Agrobacterium tumefaciens

28% id,
93% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory