Searching in Paramagnetospirillum magneticum AMB-1 (GCF_000009985.1)
Found 8 curated entries in PaperBLAST's database that match '6.3.1.1' as complete word(s).
These curated entries have 5 distinct sequences.
Running ublast with E ≤ 0.01
Found 6 relevant proteins in Paramagnetospirillum magneticum AMB-1, or try another query
| asnB AMB_RS00215 amb0042 WP_011382489.1: asparagine synthase (glutamine-hydrolyzing) is similar to: | PaperBLAST |
AsnB / b0674: asparagine synthetase B (EC 6.3.5.4; EC 6.3.1.1; EC 3.5.1.38; EC 3.5.1.2) from Escherichia coli | 34% id, 66% cov |
AsnB / b0674: asparagine synthetase B (EC 6.3.5.4; EC 6.3.1.1; EC 3.5.1.38; EC 3.5.1.2) from Escherichia coli | 31% id, 36% cov |
| asnB AMB_RS00530 amb0105 WP_011382552.1: asparagine synthase (glutamine-hydrolyzing) is similar to: | PaperBLAST |
AsnB / b0674: asparagine synthetase B (EC 6.3.5.4; EC 6.3.1.1; EC 3.5.1.38; EC 3.5.1.2) from Escherichia coli | 34% id, 65% cov |
| asnB AMB_RS00600 amb0119 WP_011382566.1: asparagine synthase (glutamine-hydrolyzing) is similar to: | PaperBLAST |
AsnB / b0674: asparagine synthetase B (EC 6.3.5.4; EC 6.3.1.1; EC 3.5.1.38; EC 3.5.1.2) from Escherichia coli | 32% id, 65% cov |
AsnB / b0674: asparagine synthetase B (EC 6.3.5.4; EC 6.3.1.1; EC 3.5.1.38; EC 3.5.1.2) from Escherichia coli | 36% id, 33% cov |
| asnB AMB_RS06425 amb1266 WP_011383678.1: asparagine synthase (glutamine-hydrolyzing) is similar to: | PaperBLAST |
AsnB / b0674: asparagine synthetase B (EC 6.3.5.4; EC 6.3.1.1; EC 3.5.1.38; EC 3.5.1.2) from Escherichia coli | 26% id, 68% cov |
AsnB / b0674: asparagine synthetase B (EC 6.3.5.4; EC 6.3.1.1; EC 3.5.1.38; EC 3.5.1.2) from Escherichia coli | 41% id, 30% cov |
| asnB AMB_RS20340 amb4020 WP_043745402.1: asparagine synthase (glutamine-hydrolyzing) is similar to: | PaperBLAST |
AsnB / b0674: asparagine synthetase B (EC 6.3.5.4; EC 6.3.1.1; EC 3.5.1.38; EC 3.5.1.2) from Escherichia coli | 32% id, 34% cov |
| AMB_RS08595 amb1695 WP_011384103.1: ankyrin repeat domain-containing protein is similar to: | PaperBLAST |
TC 1.A.4.6.1 / Q8BLA8: Cold-activated cation channel in nociceptive sensory neurons, ANKTM1, with lower activation temperature (in the noxious cold range) than TRPM8 (TC #1.A.4.5.7) (Story et al., 2003). Also called TRPA1 (Acc #AAS78661) which translates sound into electric signals in the ear. It sits at the tips of cilia in the inner ear and allows passage of K+ and Ca2+ into the cell. Vibrations in the hair cause the channel to open and close. The frequency of the sound waves generate an electrical signal of the same frequency (Jordt et al., 2004). (Shows 25% identity with α-latrotoxin precursor (TC #1.C.6.3.1.1) in its N-terminal half.) TRPA1 is a polyunsaturated fatty acid sensor in mammals, but not in flies and fish (Motter and Ahern, 2012). TRPA1 is regulated by its N-terminal ankyrin repeat domain from Mus musculus | 23% id, 27% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 6 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory