Curated BLAST for Genomes

 

Curated BLAST

Searching in Paramagnetospirillum magneticum AMB-1 (GCF_000009985.1)

Found 6 curated entries in PaperBLAST's database that match '2-oxoacid:ferredoxin oxidoreductase%subunit alpha' as complete word(s).

These curated entries have 6 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Paramagnetospirillum magneticum AMB-1, or try another query

AMB_RS10840 amb2145 WP_083763501.1: 2-oxoacid:acceptor oxidoreductase subunit alpha
is similar to:
PaperBLAST

OFOA2_AERPE / Q9YBX7: 2-oxoacid:ferredoxin oxidoreductase 2, subunit alpha; OFOR2; EC 1.2.7.11 from Aeropyrum pernix

30% id,
77% cov

OFOA1_SULTO / Q96Y66: 2-oxoacid:ferredoxin oxidoreductase 1, subunit alpha; OFOR1; EC 1.2.7.11 from Sulfurisphaera tokodaii

31% id,
71% cov

OFOA_SULSP / P72578: 2-oxoacid:ferredoxin oxidoreductase subunit alpha; OFOR; EC 1.2.7.11 from Sulfolobus sp.

31% id,
70% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory