Curated BLAST for Genomes

 

Curated BLAST

Searching in Paramagnetospirillum magneticum AMB-1 (GCF_000009985.1)

Found 6 curated entries in PaperBLAST's database that match 'D-alanine%dehydrogenase' as complete word(s).

These curated entries have 6 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Paramagnetospirillum magneticum AMB-1, or try another query

AMB_RS14080 amb2799 WP_011385177.1: D-amino-acid dehydrogenase
is similar to:
PaperBLAST

AZOBR_RS08020: D-alanine dehydrogenase (EC 1.4.99.-) from Azospirillum brasilense

49% id,
95% cov

Psest_3793: D-alanine dehydrogenase (EC 1.4.99.-) from Pseudomonas stutzeri

47% id,
97% cov

DADA1_PSEAE / Q9HTQ0: D-amino acid dehydrogenase 1; D-alanine dehydrogenase 1; EC 1.4.99.- from Pseudomonas aeruginosa

46% id,
97% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory