Curated BLAST for Genomes

 

Curated BLAST

Searching in Paramagnetospirillum magneticum AMB-1 (GCF_000009985.1)

Found 28 curated entries in PaperBLAST's database that match 'cystathionine gamma-lyase' as complete word(s).

These curated entries have 25 distinct sequences.

Running ublast with E ≤ 0.01

Found 8 relevant proteins in Paramagnetospirillum magneticum AMB-1, or try another query

cysK AMB_RS01005 amb0199 WP_011382646.1: cysteine synthase A
is similar to:		 PaperBLAST

CGL_ARATH / F4K5T2: Bifunctional cystathionine gamma-lyase/cysteine synthase; Beta-substituted Ala synthase 4;3; ARAth-Bsas4;3; L-cysteine desulfhydrase 1; DES1; O-acetylserine (thiol)-lyase; OASTL; Protein CS-LIKE; EC 2.5.1.47; EC 4.4.1.1 from Arabidopsis thaliana

 53% id,
96% cov

metZ AMB_RS21365 amb4225 WP_043745532.1: O-succinylhomoserine sulfhydrylase
is similar to:		 PaperBLAST

6k1lA / B4SII9: E53a mutant of a putative cystathionine gamma-lyase

 42% id,
98% cov

Q5H4T8: cystathionine gamma-lyase (EC 4.4.1.1) from Xanthomonas oryzae

 42% id,
94% cov

7ba4A / A0A509J8D5: Structure of cystathionine gamma-lyase from pseudomonas aeruginosa

 44% id,
89% cov

More...

AMB_RS06615 amb1300 WP_043743637.1: cysteine synthase A
is similar to:		 PaperBLAST

CGL_ARATH / F4K5T2: Bifunctional cystathionine gamma-lyase/cysteine synthase; Beta-substituted Ala synthase 4;3; ARAth-Bsas4;3; L-cysteine desulfhydrase 1; DES1; O-acetylserine (thiol)-lyase; OASTL; Protein CS-LIKE; EC 2.5.1.47; EC 4.4.1.1 from Arabidopsis thaliana

 40% id,
98% cov

AMB_RS09340 amb1847 WP_011384252.1: cystathionine beta-synthase
is similar to:		 PaperBLAST

CGL_ARATH / F4K5T2: Bifunctional cystathionine gamma-lyase/cysteine synthase; Beta-substituted Ala synthase 4;3; ARAth-Bsas4;3; L-cysteine desulfhydrase 1; DES1; O-acetylserine (thiol)-lyase; OASTL; Protein CS-LIKE; EC 2.5.1.47; EC 4.4.1.1 from Arabidopsis thaliana

 39% id,
92% cov

metC AMB_RS06585 amb1294 WP_011383705.1: cystathionine beta-lyase
is similar to:		 PaperBLAST

MCCB_BACSU / O05394: Cystathionine gamma-lyase; Gamma-cystathionase; Homocysteine gamma-lyase; EC 4.4.1.1; EC 4.4.1.2 from Bacillus subtilis

 35% id,
100% cov

metB / P56069: cystathionine gamma-lyase (EC 4.4.1.1) from Helicobacter pylori

 34% id,
100% cov

Q5H4T8: cystathionine gamma-lyase (EC 4.4.1.1) from Xanthomonas oryzae

 36% id,
95% cov

More...

AMB_RS12895 amb2562 WP_011384943.1: PLP-dependent transferase
is similar to:		 PaperBLAST

Q5H4T8: cystathionine gamma-lyase (EC 4.4.1.1) from Xanthomonas oryzae

 34% id,
94% cov

6k1lA / B4SII9: E53a mutant of a putative cystathionine gamma-lyase

 32% id,
98% cov

mecB: cystathionine gamma-lyase; EC 4.4.1.1 from Emericella nidulans
B2LXT6: cystathionine gamma-lyase (EC 4.4.1.1) from Aspergillus nidulans

 30% id,
74% cov

More...

AMB_RS05385 amb1053 WP_231848990.1: pyridoxal-phosphate dependent enzyme
is similar to:		 PaperBLAST

CGL_ARATH / F4K5T2: Bifunctional cystathionine gamma-lyase/cysteine synthase; Beta-substituted Ala synthase 4;3; ARAth-Bsas4;3; L-cysteine desulfhydrase 1; DES1; O-acetylserine (thiol)-lyase; OASTL; Protein CS-LIKE; EC 2.5.1.47; EC 4.4.1.1 from Arabidopsis thaliana

 37% id,
52% cov

AMB_RS09350 amb1849 WP_011384254.1: family 2A encapsulin nanocompartment cargo protein cysteine desulfurase
is similar to:		 PaperBLAST

6k1lA / B4SII9: E53a mutant of a putative cystathionine gamma-lyase

 27% id,
69% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 7 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory