Curated BLAST for Genomes

 

Curated BLAST

Searching in Azorhizobium caulinodans ORS 571 (GCF_000010525.1)

Found 23 curated entries in PaperBLAST's database that match '1.3.8.4' as complete word(s).

These curated entries have 19 distinct sequences.

Running ublast with E ≤ 0.01

Found 12 relevant proteins in Azorhizobium caulinodans ORS 571, or try another query

AZC_RS14650 AZC_2833 WP_012171357.1: isovaleryl-CoA dehydrogenase
is similar to:		 PaperBLAST

SM_b21121: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Sinorhizobium meliloti

 78% id,
99% cov

liuA / Q9I296: isovaleryl-CoA dehydrogenase subunit (EC 1.3.8.4) from Pseudomonas aeruginosa

 73% id,
99% cov

Shewana3_1672: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Shewanella sp.

 73% id,
98% cov

More...

AZC_RS12430 AZC_2402 WP_043879292.1: acyl-CoA dehydrogenase family protein
is similar to:		 PaperBLAST

AidB / b4187: putative acyl-CoA dehydrogenase AidB (EC 1.3.8.4) from Escherichia coli
AidB / P33224: isovaleryl-CoA dehydrogenase and DNA-binding transcriptional repressor (EC 1.3.8.4) from Escherichia coli

 45% id,
98% cov

acdH / Q9XCG5: acyl-CoA dehydrogenase subunit (EC 1.3.8.4; EC 1.3.8.5) from Streptomyces avermitilis

 28% id,
75% cov

SM_b21121: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Sinorhizobium meliloti

 29% id,
67% cov

More...

AZC_RS23810 AZC_4648 WP_012173167.1: acyl-CoA dehydrogenase family protein
is similar to:		 PaperBLAST

SM_b21121: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Sinorhizobium meliloti

 36% id,
99% cov

AO353_20350: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Pseudomonas fluorescens

 36% id,
98% cov

liuA / Q9I296: isovaleryl-CoA dehydrogenase subunit (EC 1.3.8.4) from Pseudomonas aeruginosa

 35% id,
98% cov

More...

AZC_RS02925 AZC_0576 WP_012169107.1: isobutyryl-CoA dehydrogenase
is similar to:		 PaperBLAST

acdH / Q9XCG5: acyl-CoA dehydrogenase subunit (EC 1.3.8.4; EC 1.3.8.5) from Streptomyces avermitilis

 36% id,
99% cov

SM_b21121: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Sinorhizobium meliloti

 36% id,
98% cov

PGA1_c10280: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Phaeobacter inhibens

 35% id,
98% cov

More...

AZC_RS18305 AZC_3558 WP_012172081.1: acyl-CoA dehydrogenase
is similar to:		 PaperBLAST

Shewana3_1672: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Shewanella sp.

 37% id,
96% cov

SM_b21121: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Sinorhizobium meliloti

 36% id,
96% cov

Sama_1362: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Shewanella amazonensis

 36% id,
96% cov

More...

AZC_RS16435 AZC_3187 WP_012171711.1: acyl-CoA dehydrogenase family protein
is similar to:		 PaperBLAST

acdH / Q9XCG5: acyl-CoA dehydrogenase subunit (EC 1.3.8.4; EC 1.3.8.5) from Streptomyces avermitilis

 35% id,
90% cov

PS417_17015: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Pseudomonas simiae

 30% id,
99% cov

AO356_01580: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Pseudomonas fluorescens

 30% id,
99% cov

More...

AZC_RS14880 AZC_2877 WP_012171401.1: acyl-CoA dehydrogenase family protein
is similar to:		 PaperBLAST

PGA1_c10280: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Phaeobacter inhibens

 31% id,
97% cov

Psest_1084: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Pseudomonas stutzeri

 29% id,
97% cov

liuA / Q9I296: isovaleryl-CoA dehydrogenase subunit (EC 1.3.8.4) from Pseudomonas aeruginosa

 29% id,
97% cov

More...

AZC_RS12980 AZC_2509 WP_012171035.1: acyl-CoA dehydrogenase family protein
is similar to:		 PaperBLAST

acdH / Q9XCG5: acyl-CoA dehydrogenase subunit (EC 1.3.8.4; EC 1.3.8.5) from Streptomyces avermitilis

 30% id,
98% cov

SM_b21121: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Sinorhizobium meliloti

 31% id,
92% cov

B5UB85: isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Bombyx mori

 32% id,
87% cov

More...

AZC_RS15365 AZC_2974 WP_012171498.1: acyl-CoA dehydrogenase C-terminal domain-containing protein
is similar to:		 PaperBLAST

SM_b21121: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Sinorhizobium meliloti

 26% id,
96% cov

Ac3H11_2991: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Acidovorax sp.

 25% id,
88% cov

IVD_ARATH / Q9SWG0: Isovaleryl-CoA dehydrogenase, mitochondrial; IVD; EC 1.3.8.4 from Arabidopsis thaliana
Q9SWG0: isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Arabidopsis thaliana

 26% id,
83% cov

More...

AZC_RS14875 AZC_2876 WP_012171400.1: acyl-CoA dehydrogenase family protein
is similar to:		 PaperBLAST

AO353_20350: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Pseudomonas fluorescens

 28% id,
88% cov

PS417_17015: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Pseudomonas simiae

 28% id,
88% cov

AO356_01580: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Pseudomonas fluorescens

 28% id,
88% cov

More...

AZC_RS13750 AZC_2658 WP_043879362.1: acyl-CoA dehydrogenase family protein
is similar to:		 PaperBLAST

PGA1_c10280: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Phaeobacter inhibens

 22% id,
90% cov

AZC_RS11765 AZC_2275 WP_052285915.1: acyl-CoA dehydrogenase family protein
is similar to:		 PaperBLAST

IVD_RAT / P12007: Isovaleryl-CoA dehydrogenase, mitochondrial; IVD; Butyryl-CoA dehydrogenase; EC 1.3.8.4; EC 1.3.8.1 from Rattus norvegicus
P12007: isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Rattus norvegicus

 24% id,
71% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 11 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory