Curated BLAST for Genomes

 

Curated BLAST

Searching in Azorhizobium caulinodans ORS 571 (GCF_000010525.1)

Found 6 curated entries in PaperBLAST's database that match 'D-alanine%dehydrogenase' as complete word(s).

These curated entries have 6 distinct sequences.

Running ublast with E ≤ 0.01

Found 7 relevant proteins in Azorhizobium caulinodans ORS 571, or try another query

AZC_RS10700 AZC_2066 WP_012170593.1: D-amino acid dehydrogenase
is similar to:
PaperBLAST

AZOBR_RS08020: D-alanine dehydrogenase (EC 1.4.99.-) from Azospirillum brasilense

63% id,
95% cov

DADA1_PSEAE / Q9HTQ0: D-amino acid dehydrogenase 1; D-alanine dehydrogenase 1; EC 1.4.99.- from Pseudomonas aeruginosa

62% id,
96% cov

Psest_3793: D-alanine dehydrogenase (EC 1.4.99.-) from Pseudomonas stutzeri

60% id,
96% cov

More...

AZC_RS10485 AZC_2023 WP_012170550.1: FAD-binding oxidoreductase
is similar to:
PaperBLAST

Psest_3793: D-alanine dehydrogenase (EC 1.4.99.-) from Pseudomonas stutzeri

29% id,
93% cov

DADA1_PSEAE / Q9HTQ0: D-amino acid dehydrogenase 1; D-alanine dehydrogenase 1; EC 1.4.99.- from Pseudomonas aeruginosa

29% id,
92% cov

AZOBR_RS08020: D-alanine dehydrogenase (EC 1.4.99.-) from Azospirillum brasilense

30% id,
69% cov

More...

AZC_RS15255 AZC_2952 WP_043879435.1: FAD-binding oxidoreductase
is similar to:
PaperBLAST

DADA_ECOLI / P0A6J5: D-amino acid dehydrogenase; D-alanine dehydrogenase; EC 1.4.99.- from Escherichia coli

26% id,
96% cov

AZC_RS07700 AZC_1496 WP_012170024.1: sarcosine oxidase subunit beta family protein
is similar to:
PaperBLAST

DADA_ECOLI / P0A6J5: D-amino acid dehydrogenase; D-alanine dehydrogenase; EC 1.4.99.- from Escherichia coli

23% id,
73% cov

Psest_3793: D-alanine dehydrogenase (EC 1.4.99.-) from Pseudomonas stutzeri

25% id,
66% cov

DADA1_PSEAE / Q9HTQ0: D-amino acid dehydrogenase 1; D-alanine dehydrogenase 1; EC 1.4.99.- from Pseudomonas aeruginosa

24% id,
68% cov

More...

AZC_RS06030 AZC_1172 WP_012169703.1: sarcosine oxidase subunit beta family protein
is similar to:
PaperBLAST

DADA_ECOLI / P0A6J5: D-amino acid dehydrogenase; D-alanine dehydrogenase; EC 1.4.99.- from Escherichia coli

20% id,
74% cov

DADA_KLEAE / O30745: D-amino acid dehydrogenase; D-alanine dehydrogenase; EC 1.4.99.- from Klebsiella aerogenes

22% id,
63% cov

AZOBR_RS08020: D-alanine dehydrogenase (EC 1.4.99.-) from Azospirillum brasilense

24% id,
50% cov

AZC_RS05610 AZC_1096 WP_043878949.1: NAD(P)/FAD-dependent oxidoreductase
is similar to:
PaperBLAST

DADA_ECOLI / P0A6J5: D-amino acid dehydrogenase; D-alanine dehydrogenase; EC 1.4.99.- from Escherichia coli

43% id,
11% cov

AZC_RS10490 AZC_2024 WP_012170551.1: FAD-binding oxidoreductase
is similar to:
PaperBLAST

DADA_ECOLI / P0A6J5: D-amino acid dehydrogenase; D-alanine dehydrogenase; EC 1.4.99.- from Escherichia coli

47% id,
10% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory