Curated BLAST for Genomes

 

Curated BLAST

Searching in Azospirillum sp. B510 (GCF_000010725.1)

Found 1 curated entries in PaperBLAST's database that match 'carbamoyl-phosphate synthase%small' as complete word(s).

These curated entries have 1 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Azospirillum sp. B510, or try another query

carA AZL_RS05565 AZL_010540 WP_012973676.1: glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
is similar to:
PaperBLAST

carA / CAA68238.2: carbamoyl-phosphate synthase small subunit from Lactobacillus plantarum

45% id,
54% cov

carA / CAA68238.2: carbamoyl-phosphate synthase small subunit from Lactobacillus plantarum

40% id,
38% cov

AZL_RS08465 AZL_016000 WP_012974213.1: aminodeoxychorismate/anthranilate synthase component II
is similar to:
PaperBLAST

carA / CAA68238.2: carbamoyl-phosphate synthase small subunit from Lactobacillus plantarum

34% id,
41% cov

AZL_RS25760 AZL_c02330 WP_012977357.1: type 1 glutamine amidotransferase
is similar to:
PaperBLAST

carA / CAA68238.2: carbamoyl-phosphate synthase small subunit from Lactobacillus plantarum

29% id,
44% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory