Curated BLAST for Genomes

 

Curated BLAST

Searching in Dehalococcoides mccartyi 195 (GCF_000011905.1)

Found 19 curated entries in PaperBLAST's database that match '2.5.1.48' as complete word(s).

These curated entries have 14 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Dehalococcoides mccartyi 195, or try another query

DET_RS01430 DET0248 WP_010936051.1: cysteine desulfurase family protein
is similar to:
PaperBLAST

HSERO_RS16440: O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) from Herbaspirillum seropedicae

23% id,
32% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory