Curated BLAST for Genomes

 

Curated BLAST

Searching in Geobacter metallireducens GS-15 (GCF_000012925.1)

Found 85 curated entries in PaperBLAST's database that match '2.3.1.16' as complete word(s).

These curated entries have 64 distinct sequences.

Running ublast with E ≤ 0.01

Found 28 relevant proteins in Geobacter metallireducens GS-15, or try another query

GMET_RS11145 Gmet_2213 WP_238378916.1: thiolase family protein
is similar to:
PaperBLAST

thlA1 / A5N3I5: acetyl-CoA acetyltransferase (EC 2.3.1.16) from Clostridium kluyveri

54% id,
100% cov

thl / P45359: acetoacetyl-CoA thiolase monomer (EC 2.3.1.16) from Clostridium acetobutylicum

53% id,
99% cov

AtoB / b2224: acetyl-CoA acetyltransferase (EC 2.3.1.16; EC 2.3.1.9) from Escherichia coli
atoB / P76461: acetyl-CoA acetyltransferase (EC 2.3.1.16) from Escherichia coli

53% id,
100% cov

More...

GMET_RS10385 Gmet_2058 WP_004514045.1: thiolase family protein
is similar to:
PaperBLAST

pcaF / Q51956: subunit of β-ketoadipyl CoA thiolase (EC 2.3.1.174; EC 2.3.1.16) from Pseudomonas putida

54% id,
100% cov

AtoB / b2224: acetyl-CoA acetyltransferase (EC 2.3.1.16; EC 2.3.1.9) from Escherichia coli
atoB / P76461: acetyl-CoA acetyltransferase (EC 2.3.1.16) from Escherichia coli

49% id,
100% cov

thlA1 / A5N3I5: acetyl-CoA acetyltransferase (EC 2.3.1.16) from Clostridium kluyveri

48% id,
100% cov

More...

GMET_RS10465 Gmet_2074 WP_004514591.1: thiolase family protein
is similar to:
PaperBLAST

PS417_10515 / A0A1N7U0F8: acetyl-CoA C-acetyltransferase (EC 2.3.1.16) from Pseudomonas simiae

54% id,
100% cov

thl / P45359: acetoacetyl-CoA thiolase monomer (EC 2.3.1.16) from Clostridium acetobutylicum

51% id,
100% cov

phbA / P14611: acetyl-CoA acetyltransferase subunit (EC 2.3.1.16) from Cupriavidus necator

50% id,
100% cov

More...

GMET_RS16550 Gmet_3302 WP_004512526.1: thiolase family protein
is similar to:
PaperBLAST

SO1677: 3-ketoacyl-CoA thiolase [isoleucine degradation] (EC 2.3.1.16) from Shewanella oneidensis

53% id,
98% cov

PS417_10515 / A0A1N7U0F8: acetyl-CoA C-acetyltransferase (EC 2.3.1.16) from Pseudomonas simiae

50% id,
100% cov

Ac3H11_2994: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) from Acidovorax sp.

49% id,
99% cov

More...

GMET_RS08650 Gmet_1719 WP_004513384.1: thiolase family protein
is similar to:
PaperBLAST

SO1677: 3-ketoacyl-CoA thiolase [isoleucine degradation] (EC 2.3.1.16) from Shewanella oneidensis

53% id,
98% cov

PS417_10515 / A0A1N7U0F8: acetyl-CoA C-acetyltransferase (EC 2.3.1.16) from Pseudomonas simiae

51% id,
100% cov

Ac3H11_2994: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) from Acidovorax sp.

50% id,
99% cov

More...

GMET_RS11430 Gmet_2268 WP_011366024.1: thiolase family protein
is similar to:
PaperBLAST

PS417_10515 / A0A1N7U0F8: acetyl-CoA C-acetyltransferase (EC 2.3.1.16) from Pseudomonas simiae

41% id,
99% cov

phbA / P14611: acetyl-CoA acetyltransferase subunit (EC 2.3.1.16) from Cupriavidus necator

40% id,
99% cov

AtoB / b2224: acetyl-CoA acetyltransferase (EC 2.3.1.16; EC 2.3.1.9) from Escherichia coli
atoB / P76461: acetyl-CoA acetyltransferase (EC 2.3.1.16) from Escherichia coli

40% id,
99% cov

More...

GMET_RS11065 Gmet_2197 WP_011365953.1: acetyl-CoA C-acetyltransferase
is similar to:
PaperBLAST

fadA / A0A140NDQ6: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) from Escherichia coli

40% id,
100% cov

FADA_ECOLI / P21151: 3-ketoacyl-CoA thiolase FadA; Acetyl-CoA acyltransferase; Beta-ketothiolase; Fatty acid oxidation complex subunit beta; EC 2.3.1.16 from Escherichia coli
OldA / b3845: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) from Escherichia coli
fadA / P21151: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) from Escherichia coli
P21151: acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Escherichia coli

40% id,
100% cov

thlA1 / A5N3I5: acetyl-CoA acetyltransferase (EC 2.3.1.16) from Clostridium kluyveri

40% id,
100% cov

More...

GMET_RS07700 Gmet_1529 WP_004511538.1: thiolase family protein
is similar to:
PaperBLAST

tioL / Q5P8S8: 3-oxoacyl CoA thiolase (EC 2.3.1.16) from Aromatoleum aromaticum

34% id,
100% cov

mvaE / A0A384E138: acetyl-CoA C-acetyltransferase (EC 2.3.1.16) from Methanothermococcus thermolithotrophicus

33% id,
99% cov

Q66Q58: acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Spodoptera littoralis

37% id,
74% cov

More...

GMET_RS00725 Gmet_0144 WP_004512729.1: thiolase family protein
is similar to:
PaperBLAST

mvaE / A0A384E138: acetyl-CoA C-acetyltransferase (EC 2.3.1.16) from Methanothermococcus thermolithotrophicus

31% id,
94% cov

tioL / Q5P8S8: 3-oxoacyl CoA thiolase (EC 2.3.1.16) from Aromatoleum aromaticum

26% id,
83% cov

SCP2_HUMAN / P22307: Sterol carrier protein 2; SCP-2; Acetyl-CoA C-myristoyltransferase; Non-specific lipid-transfer protein; NSL-TP; Propanoyl-CoA C-acyltransferase; SCP-2/3-oxoacyl-CoA thiolase; SCP-2/thiolase; SCP-chi; SCPX; Sterol carrier protein X; SCP-X; EC 2.3.1.155; EC 2.3.1.176; EC 2.3.1.16 from Homo sapiens
SCP2 / P22307: Non-specific lipid-transfer protein (EC 2.3.1.16) from Homo sapiens

27% id,
72% cov

More...

GMET_RS10455 Gmet_2072 WP_004514031.1: 3-hydroxybutyryl-CoA dehydrogenase
is similar to:
PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

37% id,
37% cov

GMET_RS11435 Gmet_2269 WP_081431814.1: 3-hydroxyacyl-CoA dehydrogenase family protein
is similar to:
PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

35% id,
37% cov

GMET_RS11095 Gmet_2203 WP_011365959.1: 3-hydroxyacyl-CoA dehydrogenase family protein
is similar to:
PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

34% id,
37% cov

GMET_RS08640 Gmet_1717 WP_004514137.1: 3-hydroxybutyryl-CoA dehydrogenase
is similar to:
PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

34% id,
37% cov

GMET_RS11140 Gmet_2212 WP_011365968.1: enoyl-CoA hydratase/isomerase family protein
is similar to:
PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

38% id,
27% cov

GMET_RS11115 Gmet_2207 WP_011365963.1: enoyl-CoA hydratase/isomerase family protein
is similar to:
PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

33% id,
30% cov

GMET_RS10450 Gmet_2071 WP_004514032.1: enoyl-CoA hydratase-related protein
is similar to:
PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

34% id,
29% cov

GMET_RS08635 Gmet_1716 WP_004514138.1: enoyl-CoA hydratase-related protein
is similar to:
PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

37% id,
26% cov

GMET_RS07675 Gmet_1524 WP_004511543.1: enoyl-CoA hydratase-related protein
is similar to:
PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

30% id,
33% cov

GMET_RS07920 Gmet_1575 WP_004511490.1: enoyl-CoA hydratase/isomerase family protein
is similar to:
PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

32% id,
30% cov

GMET_RS07905 Gmet_1572 WP_238378998.1: enoyl-CoA hydratase-related protein
is similar to:
PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

34% id,
28% cov

GMET_RS11200 Gmet_2224 WP_148206080.1: enoyl-CoA hydratase-related protein
is similar to:
PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

32% id,
27% cov

GMET_RS10835 Gmet_2150 WP_004513055.1: cyclohexa-1,5-dienecarbonyl-CoA hydratase
is similar to:
PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

25% id,
31% cov

GMET_RS08535 Gmet_1696 WP_004514158.1: beta-ketoacyl synthase N-terminal-like domain-containing protein
is similar to:
PaperBLAST

FADA6_MYCTU / I6XHJ3: Steroid 3-ketoacyl-CoA thiolase FadA6; Acetyl-CoA acetyltransferase FadA6; EC 2.3.1.16 from Mycobacterium tuberculosis
fadA6 / I6XHJ3: 3-oxo-acyl CoA thiolase (EC 2.3.1.16) from Mycobacterium tuberculosis

30% id,
24% cov

GMET_RS10380 Gmet_2057 WP_004514046.1: crotonase/enoyl-CoA hydratase family protein
is similar to:
PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

30% id,
24% cov

GMET_RS11055 Gmet_2195 WP_011365951.1: enoyl-CoA hydratase/isomerase family protein
is similar to:
PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

28% id,
24% cov

oah GMET_RS16565 Gmet_3305 WP_004512529.1: 6-oxocyclohex-1-ene-1-carbonyl-CoA hydratase
is similar to:
PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

24% id,
28% cov

GMET_RS16460 Gmet_3284 WP_004512507.1: enoyl-CoA hydratase-related protein
is similar to:
PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

29% id,
19% cov

fabF GMET_RS08060 Gmet_1603 WP_004511462.1: beta-ketoacyl-ACP synthase II
is similar to:
PaperBLAST

Msed_0656 / A4YEH9: acetyl-CoA C-acetyltransferase (EC 2.3.1.16) from Metallosphaera sedula

48% id,
8% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 26 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

1726959-1727918 (frame +3) on NC_007517.1 Geobacter metallireducens GS-15, complete sequence
is similar to:
PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus
Also see hits to annotated proteins above

29% id,
36% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory