Searching in Geobacter metallireducens GS-15 (GCF_000012925.1)
Found 19 curated entries in PaperBLAST's database that match '2.7.1.39' as complete word(s).
These curated entries have 13 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Geobacter metallireducens GS-15, or try another query
GMET_RS04890 Gmet_0977 WP_004514372.1: shikimate kinase is similar to: | PaperBLAST |
thrB / B8DPL9: homoserine kinase (EC 2.7.1.39) from Desulfovibrio vulgaris | 29% id, 90% cov |
ispE GMET_RS14280 Gmet_2849 WP_004514567.1: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase is similar to: | PaperBLAST |
N515DRAFT_0576: homoserine kinase (EC 2.7.1.39) from Dyella japonica | 29% id, 83% cov |
CA265_RS23470: homoserine kinase (EC 2.7.1.39) from Pedobacter sp. | 27% id, 88% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
3226927-3227832 (frame -2) on NC_007517.1 Geobacter metallireducens GS-15, complete sequence is similar to: | PaperBLAST |
N515DRAFT_0576: homoserine kinase (EC 2.7.1.39) from Dyella japonica | 28% id, 88% cov |
Lawrence Berkeley National Laboratory