Searching in Geobacter metallireducens GS-15 (GCF_000012925.1)
Found 11 curated entries in PaperBLAST's database that match '4.1.1.48' as complete word(s).
These curated entries have 7 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Geobacter metallireducens GS-15, or try another query
| trpC GMET_RS12550 Gmet_2494 WP_004514652.1: indole-3-glycerol phosphate synthase TrpC is similar to: | PaperBLAST |
P84126: indole-3-glycerol-phosphate synthase (EC 4.1.1.48) from Thermus thermophilus | 47% id, 82% cov |
trpC / Q9YGB5: indole-3-glycerol phosphate synthase (EC 4.1.1.48) from Thermococcus kodakarensis | 38% id, 97% cov |
A1KJ27: indole-3-glycerol-phosphate synthase (EC 4.1.1.48) from Mycobacterium tuberculosis | 39% id, 94% cov |
| GMET_RS12560 Gmet_2496 WP_004514650.1: aminodeoxychorismate/anthranilate synthase component II is similar to: | PaperBLAST |
TRPG_YEAST / P00937: Multifunctional tryptophan biosynthesis protein; EC 4.1.3.27; EC 4.1.1.48 from Saccharomyces cerevisiae | 47% id, 39% cov |
| carA GMET_RS08910 Gmet_1771 WP_004513332.1: glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit is similar to: | PaperBLAST |
TRPG_YEAST / P00937: Multifunctional tryptophan biosynthesis protein; EC 4.1.3.27; EC 4.1.1.48 from Saccharomyces cerevisiae | 30% id, 34% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 2836624-2837472 (frame -2) on NC_007517.1 Geobacter metallireducens GS-15, complete sequence is similar to: | PaperBLAST |
P84126: indole-3-glycerol-phosphate synthase (EC 4.1.1.48) from Thermus thermophilus | 41% id, 100% cov |
Lawrence Berkeley National Laboratory